| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0778 |
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| Symbol | |
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| ID | 8490763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 785620 |
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| End bp | 786264 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646358809 |
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| Product | SAF domain protein |
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| Protein accession | YP_003238771 |
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| Protein GI | 260892674 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000467873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCGGC AGAAGTTCTT CTTCCTGATG GCCGTCCTGG CGGGGCTGGT GGCGGCGGGC
TCCCTGGCCT GGCTGCTGAG CGCGTTCCTG CCGCAGAAGA CCGTGCTGGT GGCGAAGTCG
GACGTCCCCG CGCGGGGCCC CGTGACCGAA GTGGAAGCGG TGAGCCTCCC GAAGGCGGGA
CTGCCGCCCG ACGCCGTGAC CGAGAGGGGA GAGCTGGCCG GGAAGGTCGC CCGGGGGTTC
ATCCCCGCCG GGACCGTCCT GCGCAGGGCC ATGCTGCAAC CCAAGTGGGC GGCGGGCGCC
GCGGGGGCGC TGGCGGAGAT CGGCCCCGGC TACCGCATGC TGGCCCTGCC CCTGACGGCG
GACACCACGG TCGGGGGCTG CGTGGCGTCC GGCGACAGGA TAGACGTCTA CCTGGTACGC
GGTGGCCGGG CGGAGCTGGT GGCCGCCGAC GTGCTGGTGT TCTCCGGCCC CGGCGTCCCC
TCGCGGGAAG GCAAGAAGGG CTTTGGGGCC CTGACCGGCG GCGACAGAGA GCAGGAGAAA
AGGGACTCCC TGGTGGTCGT GGTGCGGCCG GACGAGGCGG AGAGGCTGGT GTCGGCCCTC
GGGGGAGACG GCAAACTGGT GGCGGTCCTC CGCCCCCTCG ACTGA
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| Protein sequence | MTRQKFFFLM AVLAGLVAAG SLAWLLSAFL PQKTVLVAKS DVPARGPVTE VEAVSLPKAG
LPPDAVTERG ELAGKVARGF IPAGTVLRRA MLQPKWAAGA AGALAEIGPG YRMLALPLTA
DTTVGGCVAS GDRIDVYLVR GGRAELVAAD VLVFSGPGVP SREGKKGFGA LTGGDREQEK
RDSLVVVVRP DEAERLVSAL GGDGKLVAVL RPLD
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