| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0162 |
|---|
| Symbol | |
|---|
| ID | 8490123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 156076 |
|---|
| End bp | 156993 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646358198 |
|---|
| Product | cysteine synthase |
|---|
| Protein accession | YP_003238184 |
|---|
| Protein GI | 260892087 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGAGCAA GGGAATGGGA AAACCTCATC GGCCGCACTC CGCTCGTCCT GCTTAAACGG
TTGGGCGGGA AGGCTACCAT CTTGGCCAAG TGCGAGTGGT TCAACCCGGG GGGCAGCGTC
AAAGACAGGG CGGCCCTTTT TATGCTTAAG GAGGCCCTGG CTTCCGGCAA ACTTGCACCC
GGCGGCACGG TGGTGGAGCC CACCAGCGGC AACACCGGCA TAGCCCTGGC CTGGCTTAGC
CGGCGCCTGG AGCTTCAAGT GGTGATCACC ATGCCGGAAA ATATGAGCCG CGAGCGCGTT
GACTTGCTAA CTGCTTACGG TGCTAAAGTG GTTCTCACCC CGGCGGAGAA GGGCCTGCCC
GGAGCGGTGG AAGCGGCTAA AGAGCTGGTG CAGGAAATGA AAGGTGCTTT CATGCCCGAC
CAGTTCAGCA ATCCGGCCAA CGCCGAGGCG CACTACCGCA CTACTGGTCC GGAGATCTGG
GAGGATACCG AAGGCCGGGT GGACATAGTG GTGGCGGGGG TGGGTACGGG GGGTACCTTA
ACCGGCATAG CCCGCTACCT TAAGGAAAGG AAGCCAGAGG TGCAGGTGGT GGCGGTGGAG
CCGGCCGAGT CGCCGGTCCT CTCGGGAGGG AAGCCGGGCA GGCACGGCAT TCAGGGAATA
GGAGCGGGTT TCGTTCCTCC TTTACTGGCT CGCGAGCTTA TCGACGAGGT CATTCTCGTT
ACCACCGCAG AGGCGGTGGC AACCTGCCGG GAGCTGGCGG CAAAGGAAGG TATCCTGGCG
GGCCTGTCTT CCGGGGCGGC CTGCCGGGCC GCTTTAAAGC TTGCCTCCCG GCCGGAAAAC
CGAGGAAAGG TTGTCGTTGT CATCTTTCCG GACAGCGGGG AGCGCTATAT TTCCTTGGGG
CTCTGGAGAA AAGCTTAA
|
|---|
| Protein sequence | MRAREWENLI GRTPLVLLKR LGGKATILAK CEWFNPGGSV KDRAALFMLK EALASGKLAP
GGTVVEPTSG NTGIALAWLS RRLELQVVIT MPENMSRERV DLLTAYGAKV VLTPAEKGLP
GAVEAAKELV QEMKGAFMPD QFSNPANAEA HYRTTGPEIW EDTEGRVDIV VAGVGTGGTL
TGIARYLKER KPEVQVVAVE PAESPVLSGG KPGRHGIQGI GAGFVPPLLA RELIDEVILV
TTAEAVATCR ELAAKEGILA GLSSGAACRA ALKLASRPEN RGKVVVVIFP DSGERYISLG
LWRKA
|
|---|
| |