| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5224 |
|---|
| Symbol | |
|---|
| ID | 8450855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5823820 |
|---|
| End bp | 5824554 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645044255 |
|---|
| Product | GntR domain protein |
|---|
| Protein accession | YP_003204479 |
|---|
| Protein GI | 258655323 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAC CGGCCGGTTG GGAACCCGTT CAGCGCGTGC CGACCTATGA GCTCGTGCTC
CGGCGCATCG AGGAACAACT GATCAACCGC ACGCTGCGGC CCGGGGATCG ACTCCCACCC
GAGCGTGAGC TGGCCACGAT GCTGGGCGCG TCCCGCCCGG CCGTGCGCGA AGCGCTGCGG
GTCCTGCAGG CTCAGGGCGT CGTCCGGTCG GCGGTCGGTA CCGGGGCGGA CTCCGGGACC
ATCGTGACCC AGGCGCCCTC GGGCGCGCTG ACCCGGCTGC TGCGGGTGCA CCTGGCCGTT
GCCTCGTTCC CGCTGTCCGA CGTCGTCGAG TCGCGGGTGA TGTTCGAACG GTTCAGTGCG
CTGGGCGCGG CCAAGGCGAT GACGCCCGAG GTCCTGGCCC GGATCGAGAA GCCCTTGCTG
GCGATGGACG AGCCCGACAT CGAGCGGGCC CGGTTCAACG AACTGGACAC CGAGTTCCAC
GTCGCGATCG CCGAGGCCGG CGGCAACCAG TTCATCGCCG ACCTGACCGT GGCCGTGCGG
GAGTCGATTC GCAGCGACAT CCTGGGCACG CTCGAGCAGG CCGGCGACTG GCCGGAGATC
CGGGACGGCC TGCGGGCCGA CCATCATGCG ATCTATCAGG CGCTGGCCAC CGCCGATGGT
CCGGGCGCCG CGGATGCGCT GGAGCGCCAC ATCGAGGGCT TCTACGTCCG CATGAAAGTC
GGCGTGTCCG GCTGA
|
|---|
| Protein sequence | MAAPAGWEPV QRVPTYELVL RRIEEQLINR TLRPGDRLPP ERELATMLGA SRPAVREALR
VLQAQGVVRS AVGTGADSGT IVTQAPSGAL TRLLRVHLAV ASFPLSDVVE SRVMFERFSA
LGAAKAMTPE VLARIEKPLL AMDEPDIERA RFNELDTEFH VAIAEAGGNQ FIADLTVAVR
ESIRSDILGT LEQAGDWPEI RDGLRADHHA IYQALATADG PGAADALERH IEGFYVRMKV
GVSG
|
|---|
| |