Gene Namu_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3590 
Symbol 
ID8449209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3944197 
End bp3944730 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content72% 
IMG OID645042663 
ProductGrpE protein 
Protein accessionYP_003202899 
Protein GI258653743 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00352283 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0900367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC CCGAGGCACC CAGGACCCAG ACCGCATCCA ACAGGACAGG AAGCGACGAG 
GCTCCGGCGA ACGAGACCCC CGAGCGCGTC GACCAGGCGC TCCAGATCGC GGAGCTGGAG
GACGCGTGGC GGCGCACGGC TGCCGAGCTG GAGAACTTCC GCAAGCGTTG CGCGCGGGAC
ATGGTCCGCG GCCGCGAGCA GGAACGGGCG GCCGTGGCAA CCAGTTGGCT ACCCGTCCTG
GACAACCTGG AGCGGGCGCT CGAGCACGCG TCGTCCGACC CCGACCCCGA CACCGTCGTC
GAGGGTGTCC GTGCCGTGCT GGCGCAAGCG GTCGGCGTCC TTGCCGACCT CGGCTACCCG
CGTCGCGACG ACGACGGCAG GGCTTTCGAC CCGGCCGTGC ACGAGGCGGT CGGCACTGTG
TCCGGTGAGG GGCTGGTGCC GGGCACCGTG GCCCAGGTCG TGCGACCCGG CTACGGGCCC
GATGACAAGA TCCTGCGACC GGCCGCGGTC GTGGTGGCGA CCAGGGCAAG CTGA
 
Protein sequence
MSDPEAPRTQ TASNRTGSDE APANETPERV DQALQIAELE DAWRRTAAEL ENFRKRCARD 
MVRGREQERA AVATSWLPVL DNLERALEHA SSDPDPDTVV EGVRAVLAQA VGVLADLGYP
RRDDDGRAFD PAVHEAVGTV SGEGLVPGTV AQVVRPGYGP DDKILRPAAV VVATRAS