Gene Namu_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1910 
Symbol 
ID8447517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2103643 
End bp2104182 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content72% 
IMG OID645041040 
Productphage tail protein 
Protein accessionYP_003201288 
Protein GI258652132 
COG category[R] General function prediction only 
COG ID[COG4385] Bacteriophage P2-related tail formation protein 
TIGRFAM ID[TIGR02242] phage tail protein domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.162255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000215371 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCGAG GATTGGTGCC CGGGCTGGCC AGCCCGTACC CGATCGGCGC GACGCTGCCG 
GCGGTGTTCC TGGGCGACTC GTTCACCCAG CGCTGGTGCG CGGCGCTGGA CGAGGTGCTC
GCGCCGATCA TCACCACCCT GGACTCACTG CCCGCCTACC TCGACCCGGC CACCGCGCCC
GAGGACATGC TGCCGTGGCT GGCCGGGTGG ATGGGCATCG CCCTGGACGG GCACCAGAGC
GCCGAACGGC AACGGGAACT GGTCCAGATC GGGGTCGAGC TGCTGCAGTG GCGGGGCACC
GCCCGGGGGA TCCGGGCCGC CGTCCGTGCC CTGTTTGACC TGGACCCGGA GCTGATCGAG
TCGGGCGGCA CGGGTCAGTC CACCGAACCC GGCAGCGCGC TACCCGGCAC CGATCAGCCG
GAGTTGATGG TCCGGCTGCG GGTGCCGAAC CCCGAGGAAT TCGACGTGCG CCGGCTGGAC
GCGCTGGTGG ACATGGCCAA GCCGGCGCAC ATCCCGCACC GGGTCGAGAT CACGGGGTGA
 
Protein sequence
MTRGLVPGLA SPYPIGATLP AVFLGDSFTQ RWCAALDEVL APIITTLDSL PAYLDPATAP 
EDMLPWLAGW MGIALDGHQS AERQRELVQI GVELLQWRGT ARGIRAAVRA LFDLDPELIE
SGGTGQSTEP GSALPGTDQP ELMVRLRVPN PEEFDVRRLD ALVDMAKPAH IPHRVEITG