Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0060 |
Symbol | |
ID | 8445639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 71270 |
End bp | 72055 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645039210 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003199486 |
Protein GI | 258650330 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 86 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATGC TGGGAGTGCA TGTCGGAGCC CGGGAGGACG ACGGCGACCC GGTCGCGGAA GCGGCCGCGT CCGGCGCGGA CGGGGTGCAG GTCTTCCTGG CCGACCCGCA GGGCTGGAAG ACGCCCAAGG CCCACCCGCA CGCGGAGGCG ATGCGGGCGG CCGGGCTGAC GGTGTTCGTG CATGCGCCCT ACATCGTGAA CGTGGCGACC ACCAACAACC GGATCCGTAT CCCGAGTCGC AAGCTGCTCG CGGCGCACGC CAAGGCCGCC GCCGAGACCG GCGCCAGTGG GCTCATCGTG CACGGCGGGC ACGTGCTGGC CAAGGACGAT CCGCAGGTCG GGTTCGACAA CTGGCGCAAG GTGTTCGAGC GGCAGGCGCA GGAGGGTGGC TTCCCGGTCC CGGTGCTGAT CGAGAACACC GCCGGTGGGG ACAAGGCGAT GGCCCGGACC CTGGAGGAGA TCGCCCGGCT CTGGGATGCG GTCGGCGAGT TCGACGCCGG GTTCGTCCTG GACACCTGCC ACGGCTGGGC CGCCGGACTG GACCTGAGCA GCGTCGTCGA CGACATCAAG GCCATCACCG GACGGATCGA CCTGGTGCAC GGCAACAACT CCCGGGACGA GGCCGGCTCC GGTCGGGATC GGCACGCCTC GTTCATCGAC GGCGAGATTC CCGCCGCTGT GTTGGCGGAC GTGGTGCGGG CGGCCGGCGC CCCGGTGATC CTGGAGACCC CGGGCGGCCC GGACGAGCGG GCCCCGGAAA TCCAGTTCCT GCGCTCCTCC CTCTGA
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Protein sequence | MVMLGVHVGA REDDGDPVAE AAASGADGVQ VFLADPQGWK TPKAHPHAEA MRAAGLTVFV HAPYIVNVAT TNNRIRIPSR KLLAAHAKAA AETGASGLIV HGGHVLAKDD PQVGFDNWRK VFERQAQEGG FPVPVLIENT AGGDKAMART LEEIARLWDA VGEFDAGFVL DTCHGWAAGL DLSSVVDDIK AITGRIDLVH GNNSRDEAGS GRDRHASFID GEIPAAVLAD VVRAAGAPVI LETPGGPDER APEIQFLRSS L
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