Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2470 |
Symbol | |
ID | 8420332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2830406 |
End bp | 2831761 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645039073 |
Product | Chromosomal replication initiator DnaA domain protein |
Protein accession | YP_003199330 |
Protein GI | 258406588 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000450435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000021733 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGCAA ACAAACCGGT TTGGCATCTT CCTGCACATG AACTGAAATC CATCGTGCGT TCCCATCTGG CGCAAACCCG CTCTGAAACT GAAATCAGGC GCTGGTTTGA CCCGCTCGAT TTCACCGTCC GTTCACAACC GTTCACCCTT GTTATCGGCT TTCCCCACGC CTTTTTCCAC GACCCTTTCA TTGCAGCCTT CCAGACCGAT TTCGAGCAGG CGGTGGCCGA CACGTTGGGA AGCGCCACGG CACTGCGCTA CGCCTGCCCG CAACCAGGAG GAAGCACCAC GGCCCAGCAC GTCTCTTTGG TGGCCCCGCG CAAGCACACG CCTCCCACCA ATGGTTCAGA CAGCTACACT TTTGAAAATT TTCTAACAAA TAAAAAAAAT TACTTTCCCT ACGCCTCGGC CCGTGAGGCC ATCGCTGCGC CGGGGAAAAA ATACAACCCC CTCGTCCTGA GCGGCGGCTC CGGAACCGGC AAAACCCATC TCTTAAAAGC GATGGCCCAG GCCTTTCGCG ATCGGTTTCC GGAACAAAAA ATTCTCTATT TTACGGTCGA CGATCTGCAC ACCTTTTACA AAGAGGCCGG TGGGGATATG GCCCGGAGTT CCCTGATCGC CTCCCACCTC TTGCTGATCG ATGACCTGCA GTCGCTGCAG TTGTACAACT ACCTGCAAAC CGAATTGCTG CTCATTTTCA ACGCCCAATA CGAACAAAGC GGCCAACTCG CCTTTGCCTG CCGCGGCAAA CTCCCGGAAT GCGGTTTTTT GGAACCAACG TTGCTTTCCC GTCTGGAATG GGGGCTGATG GTCCATCTCA AGACCCCGGA CCTGGAGCTC CGCGTCCAAT ATCTGCACAC CGCTAACCAA AAAAAGCGCC TCGGCCTCAG CCGGAGGCAC ATCTTGCTCC TCGGGCAACA CTTTAAAGAT TTTAGGTACT TACAAGGTGT AATAACAAAG CTCTGCGCCT ATAAGGAACT CATTTCCCCT GAACTCAACG ACGAGGCGCT GTTTCAGATC ATCGGCAGCC TGGATTCCAG CAAACCAACA GCCGTGTCTC CCGAACACAT CTTCACCATC GTCGCCACCC ATTTTGGGAT CACCTACCAG GACCTGCGCG GGGCAAGGCG TCTGCGGAGC ATTGTTTTTG CCCGGCAAAT AGCCATGGCC CTGTGTCGTT CGGAACTGGG GCTGTCCTAC CCCCAGATTG GGCGACTCTT TGGGGGTCGC GACCACACCA CCGTCATGCA CGGTATAAAA AAAGTACAAA AATTACAGAA AATTAACCAT GAAACGAACA CACTTTTCAA CACTTTGAAA CACCAATGTC ACAGTTTGGC TGAACAACAC CCCTGA
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Protein sequence | MSANKPVWHL PAHELKSIVR SHLAQTRSET EIRRWFDPLD FTVRSQPFTL VIGFPHAFFH DPFIAAFQTD FEQAVADTLG SATALRYACP QPGGSTTAQH VSLVAPRKHT PPTNGSDSYT FENFLTNKKN YFPYASAREA IAAPGKKYNP LVLSGGSGTG KTHLLKAMAQ AFRDRFPEQK ILYFTVDDLH TFYKEAGGDM ARSSLIASHL LLIDDLQSLQ LYNYLQTELL LIFNAQYEQS GQLAFACRGK LPECGFLEPT LLSRLEWGLM VHLKTPDLEL RVQYLHTANQ KKRLGLSRRH ILLLGQHFKD FRYLQGVITK LCAYKELISP ELNDEALFQI IGSLDSSKPT AVSPEHIFTI VATHFGITYQ DLRGARRLRS IVFARQIAMA LCRSELGLSY PQIGRLFGGR DHTTVMHGIK KVQKLQKINH ETNTLFNTLK HQCHSLAEQH P
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