Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2234 |
Symbol | |
ID | 8420091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2537231 |
End bp | 2538745 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038834 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_003199096 |
Protein GI | 258406354 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTAAGC AGAAGAAAGA CAAAGCAGGG ACTGAAAGTC AGGTCATCAA AAACCGCTGG GACAAAGCGC AGAATTTCGC CGAACAGGGT CTGGCGCTGT TCGGGAACAC GTTTCGCAAG GATACGGATA TTCAGGACCT GATCCAGTCC TATGAGTCCC TGAGCGCTGA AGATCTTGAA AACGTGGAGC ACACGTTTGC CTTGGCCGGT CGGATCATGG CCATTCGCTC GTTTGGCAAG GCCACTTTCA TGCATATCCA GGACAGCACC GGCAAACTCC AGGTCTTTGT CCAGCGTGAT GCGGTCGGAG CTGATCTGTA CAAGCTCTTT AAAAAGTTCG ATGTCGGTGA CATCGTCGGT GTCCGGGGGA CGCTTTTTCG GACCCGAACC GACGAATTGA CGCTCAAGGC GGAGCATGTC GAACTGGTCA CCAAATCCAT GCGGCCGCTT CCGGAAAAAT ACCACGGCCT CAAGGATGTC GAGACCAGGT ATCGCCAGCG ATACGTCGAT CTGATCGTTA CCCCCCAAGC TCGGGATATT TTTGTCAAAC GGACCCGTAT CGTCCAAGGG TTACGCCATT TTCTGGACAA TCGTGGCTTC ATGGAGGTTG AGACCCCCAT GATGCAGCAC ATTCCGGGCG GGGCGACGGC CCGGCCGTTT GTGACCCACC ACAACGCGCT GGATATGGAG CTTTACCTGC GCATCGCGCC GGAGCTGTAT CTGAAGCGAC TGTTGGTCGG CGGGTTGGAG CGGGTGTATG AAATCAACCG CAATTTCCGG AATGAAGGCA TCTCCACACA GCACAATCCA GAATTCACCA TGCTCGAATT CTATTGGGCC TACGCCGATG TCTACGATCT CATGGATCTG ACCGAGGAGA TGTTTGCCCA ATTGGCCCAG GACGTCTGCG GGACGACCCG GATTACCTAT CAGGGGCAGG AGATCGAGCT TGGCGGCCGC TGGAACAGGT TGACCTTCCA CCAGGCCCTG GAGGAGATCG GGGGACTTGA GCCGCAGCAG TATCAGGACC ATGATCAGGC CCAGGCCCTG GTCCAGCGGC TGGGCGAGAA TGTCCAGACC GGAGAGCAAC TCGGCAAGAC CCAAGCCAAA TTGTTCGATC TGCTGGTGGA GCCCAAACTC ATCCAGCCCC ACTTTATTTC GCACTACCCG ACCGACATTT CCCCCTTGTC CCGGCGCAAT GAGGAGAACC CTGAACTCAC AGACCGCTTT GAACTGTTTA TTTGCGGCCG TGAAATGGCC AACGCGTTTT CCGAACTCAA CGACCCCTTT GACCAGCGGC AGCGCTTCGA ACAGCAGGTG CAGGAAAAAA GCGCCGGCGA TGATGAGGCC CACGCCATGG ATGAAGACTA TCTCCGCGCT TTGGAGTACG GCATGCCGCC AGCGGCCGGC CAAGGGGTGG GCATCGACCG TCTGGTCATG CTTTTGACGG ACTCGGCTTC GATTCGTGAA GTTATCCTCT TTCCGTTGCT GCGGCCGGAA ACCAAGACAG AATAA
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Protein sequence | MSKQKKDKAG TESQVIKNRW DKAQNFAEQG LALFGNTFRK DTDIQDLIQS YESLSAEDLE NVEHTFALAG RIMAIRSFGK ATFMHIQDST GKLQVFVQRD AVGADLYKLF KKFDVGDIVG VRGTLFRTRT DELTLKAEHV ELVTKSMRPL PEKYHGLKDV ETRYRQRYVD LIVTPQARDI FVKRTRIVQG LRHFLDNRGF MEVETPMMQH IPGGATARPF VTHHNALDME LYLRIAPELY LKRLLVGGLE RVYEINRNFR NEGISTQHNP EFTMLEFYWA YADVYDLMDL TEEMFAQLAQ DVCGTTRITY QGQEIELGGR WNRLTFHQAL EEIGGLEPQQ YQDHDQAQAL VQRLGENVQT GEQLGKTQAK LFDLLVEPKL IQPHFISHYP TDISPLSRRN EENPELTDRF ELFICGREMA NAFSELNDPF DQRQRFEQQV QEKSAGDDEA HAMDEDYLRA LEYGMPPAAG QGVGIDRLVM LLTDSASIRE VILFPLLRPE TKTE
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