| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2094 |
|---|
| Symbol | |
|---|
| ID | 8419944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2382411 |
|---|
| End bp | 2383928 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645038687 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_003198956 |
|---|
| Protein GI | 258406214 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.141027 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAT ATATCGGTGC CGTGGACCAA GGAACGACCA GCAGTCGATT CATCATTTTT
GACAAAGCCG GGCGTATCGT CGGCCAGGAT CAAAAGGAAC ACCAGCAGAT TTTTCCCCAA
CCCGGCTGGG TGGAACACGA CCCCATGGAA ATCTGGGACA ACACCCAGGA GGTTATCCGC
GGAGCTTTGA CCAAGGCAGG GATATCCGGA AAGGAACTGG CGGCCATTGG GATCACCAAC
CAGCGAGAGA CCACGGTGGT CTGGGACCGC AATACCGGCA AGCCGTTTTT CAACGCCGTG
GTCTGGCAAT GCGCCAGGAC CTACGACATC TGCAAGGAAT TGATCCGAGA GGGGGGGCAA
GACCGGTTTC GCGAAACCAC CGGACTGCCG GTGGCGACTT ATTTTTCCGG CCCGAAGATC
AAATGGATTC TGGACCAGGT CCCTGAGGCC AGACGAGCTG CCGAGGCGGG GGACGCTCTG
TTCGGGACCA TGGAGACCTG GATTATCTGG TGGCTGACCG GCGGCCCGAA AGGCGGGGCC
CATGTCACGG ATGTGACCAA CGCCAGCCGG ACCATGCTCA TGGATCTGCA GACCCTGCAG
TGGGACGATT CCATCTTGAA GGTGCTGGGC ATCCCCAGAC AAGGCCTGCC GCGGATTGTC
CCCTCCAGCG ATGATCGCTC CTGGGGACCG ACCTCGGAGA GCGGTCCCCT CGGTGCCCGG
GTCCCGGTGT GCGGAGCGGT TGGGGACCAA CAGGCCGCCC TGGTCGGGCA GACCTGTTTC
GAGCCCGGGG AGGCCAAGAA CACCTACGGC ACCGGCTGTT TTCTCCTGCT GCACACCGGA
CATGAACCGA TTCCTTCCAG GCACGGCCTG ATCACAACCT TGGCCTATCA GTTCAGCGGC
CGGCAACCGT CGTACTGTCT GGAAGGCTCG ATCGCCATCG CCGGGGCTCT TGTGCAGTGG
GTGCGCGACA ATCTGGGGAT GATCCAGGAC GCTTCTCAGA TCGAGGAATT GGCCACCCAG
GTCGAAGACA CGGGGGGCGT TTATGTCGTG CCTGCCTTTT CCGGACTGTT TGCCCCCTAT
TGGCGTCCAG ACGCCCGCGG TGTCATTACA GGGCTGACAC GCTACGCCAA TAAGCACCAT
TTGGCCCGGG CCGTTCTGGA GGCCACAGCC TATCAGACCA AGGACATTGT CGAAGCCATG
GACAAGGATT CCGGCGTGAC CCTCAAACGG TTGAAGGTGG ACGGCGGCAT GGTCCAGAAC
GAGTTGCTGA TGCAGTTCCA GTCCGACATC CTCGATGTGC CGGTGATCCG TCCGCAGGTC
GCTGAGACGA CCTGTCTCGG CGCTGCCTAT GCCGCAGGCA TTGCTTCCGG GTTCTGGTCC
GGCCGTGAGG AATTGCGCAA CAATTGGGTG GAGGACAAGC GGTGGGAGCC CGCCATGGAA
GCCGGCCACC GGGCCAAGCT CTATGCCGGA TGGGGGAAGG CGGTCGAGAG GACCTTGAAC
TGGATTGACG ACGATTAA
|
|---|
| Protein sequence | MPQYIGAVDQ GTTSSRFIIF DKAGRIVGQD QKEHQQIFPQ PGWVEHDPME IWDNTQEVIR
GALTKAGISG KELAAIGITN QRETTVVWDR NTGKPFFNAV VWQCARTYDI CKELIREGGQ
DRFRETTGLP VATYFSGPKI KWILDQVPEA RRAAEAGDAL FGTMETWIIW WLTGGPKGGA
HVTDVTNASR TMLMDLQTLQ WDDSILKVLG IPRQGLPRIV PSSDDRSWGP TSESGPLGAR
VPVCGAVGDQ QAALVGQTCF EPGEAKNTYG TGCFLLLHTG HEPIPSRHGL ITTLAYQFSG
RQPSYCLEGS IAIAGALVQW VRDNLGMIQD ASQIEELATQ VEDTGGVYVV PAFSGLFAPY
WRPDARGVIT GLTRYANKHH LARAVLEATA YQTKDIVEAM DKDSGVTLKR LKVDGGMVQN
ELLMQFQSDI LDVPVIRPQV AETTCLGAAY AAGIASGFWS GREELRNNWV EDKRWEPAME
AGHRAKLYAG WGKAVERTLN WIDDD
|
|---|
| |