Gene Dret_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1508 
Symbol 
ID8419337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1752828 
End bp1753229 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content52% 
IMG OID645038082 
Productprotein of unknown function DUF1232 
Protein accessionYP_003198372 
Protein GI258405630 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.987063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0931118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATGA CTCAGAAACA ACAGGATAAA GCCAAGCAAC GGTTTTACGA GGACATCGAC 
AATGTGGACG GCAACGATCT CGAATATGCC TCCAAGAAAG GCCGCAAGAA GGTCGACAGC
CTGGACGGGG ATCCGCCTGG CGCCCTGGAA AAGCTCTGGG ATGATATCAA GACCATGATC
CAACTCATCT GGGACTATCG AAACGGCAAC TACAAAGCCG TGCCGTGGAA AATCATCGCT
GCCGTGGTCG CAGCTGTGAT CTATTTTGTC AGCCCGATCG ATTTCATCCC GGATTTTATC
CCCGGCCTCG GCTATATCGA TGACGCCCTG GTCATCAAAC TCGCCCTGGA TATGGCCGGC
GAAGACCTCG CCTCGTATAA AGAATGGAAA AAAACGCTGT GA
 
Protein sequence
MGMTQKQQDK AKQRFYEDID NVDGNDLEYA SKKGRKKVDS LDGDPPGALE KLWDDIKTMI 
QLIWDYRNGN YKAVPWKIIA AVVAAVIYFV SPIDFIPDFI PGLGYIDDAL VIKLALDMAG
EDLASYKEWK KTL