Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1273 |
Symbol | |
ID | 8419101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1493532 |
End bp | 1494461 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645037848 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003198139 |
Protein GI | 258405397 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0230632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.266535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCTAGATA AGGATATTGA CAGCCAACTC CTGCGCGCGT TTGTGACCGT GGCCGAACTC GGTAGTTTTA CCCGGGCCGC GACGAAGCTC TATCGGACCC AATCAGCGGT GAGCATGCAG GTCCGCCGGC TGGAGCAGCA ACTCGGCAAG AAACTGCTGG CCCGTTCCAG CCGGCAGGTG ACTTTAACCA GCCTGGGGGA AATGGTCCTG CCGTATGCGC GGCGCATCCT GCGCATCCAG GAGGCCATGC TCAACGAAGT CGGACAGGAG CAGATCTCAG GCAAGGTCCG TCTGGGCATG CCCGACGATT ACGCGGCGTA TTTCCTGCCC CAGGTCCTGT CCCACTTCGG GTTATTGTAC CCGAATATCC AAATGGAGAT TTTCTGCGAA CTCAGCCGGA ATCTGGAACC GATGGTCCAT TCCGGAGAAA TCGACCTGGC CGTGGTCACC CGGCACCCGG AGAACGCCAG CGGACGCTTC GTCCGTCGTG AACAACTCGT CTGGGTCGAA GACGCCCAAG CCTTTGCCCA CGAGCAGCAG CCACTGCCCC TGGCCCTCTT TCCCGAAGGA TATTGCGCCT TCCGGCTCCA GGCCCTCAAG GCCCTGGAAA ACGCGGGCAC CCCGTGGCGC ATCATTTGCG AAAGCCGCGG TTTGGCCGGG ATTCGGGCCA CGGTCAGCGC CGGTCTGGCC GTGACCGTCG TGACCCGGAA CACCTTGTCG CCGACCATGC GCATCATCGG TCCGGAACAG GGATTGCCGG ATCTGCCCGA AATCGAAATC GGGTTGCTCA CACCGGGGTG GGGCGAGGAC GAGGCAACAG ATGTCCTGGC CTCGCACATT CTCGAAAGTC TGCGCCACGA AGGGAATGGC ACGGCCACCC CAGAGGTCGA ACCGCTCTCC AACGAACCCA GCGCCCCGCG GGGTATGTAG
|
Protein sequence | MLDKDIDSQL LRAFVTVAEL GSFTRAATKL YRTQSAVSMQ VRRLEQQLGK KLLARSSRQV TLTSLGEMVL PYARRILRIQ EAMLNEVGQE QISGKVRLGM PDDYAAYFLP QVLSHFGLLY PNIQMEIFCE LSRNLEPMVH SGEIDLAVVT RHPENASGRF VRREQLVWVE DAQAFAHEQQ PLPLALFPEG YCAFRLQALK ALENAGTPWR IICESRGLAG IRATVSAGLA VTVVTRNTLS PTMRIIGPEQ GLPDLPEIEI GLLTPGWGED EATDVLASHI LESLRHEGNG TATPEVEPLS NEPSAPRGM
|
| |