| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1114 |
|---|
| Symbol | |
|---|
| ID | 8418941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1306085 |
|---|
| End bp | 1306963 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037688 |
|---|
| Product | tol-pal system protein YbgF |
|---|
| Protein accession | YP_003197980 |
|---|
| Protein GI | 258405238 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.875403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0458265 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGAC GATTCCTGTC AATGGTTATC AAAGGGACCT GCATCGCTGC CACCGGCCTG
GTCCTGTCCG GGTGCGTCAT CAGTCAGCAG GATTTCAGCC GTTTGCAACA GCAGGTGGCC
CAGCAAGGAC GAATGCAGCG GCAGATGCGT CAGGATGTAA AATCCCTGCG CAGCAGTTTG
CAGCAAACAC AATCCCAGTT ACAGCAAAAG ATCGAGGCCA CAAGTTCCCC GGTCCGTTCG
ACCCAGGCCA ATCTCACCGC TGATATGCGC TCTTTGCAGG TGGCGGTGGC CGAGGTTCGG
GGCCGCGTCG ACGCGCTGGA GCGCCGGGTC GACTCCCTGG CTCGCACGCA GGCCAATGCC
ACGGCCCAAC TGACTGACCT GACCTCCAAC AACACCGATG TTGCGCTGCC GGAAAACGCC
ACGCAGCCGA GCCAACTCCA GGCGGGGCCA TCCAATGCCA CCAACGGCAC ACCGGCTGAG
GCCGAGGCGC CGCAGACATT CGACTCGCCT CAGGCCATGT ACGACGAAGC CCTGGCCCAG
TTCCGGAAAC GCAATTACCA GAATGCCCAG GCCTTATGGG CCCGCTTTAT TGATGAAAAT
CCCAAGAGCG ACCTCGTCCC CAACGCCTAT TTCTGGCAGG GCGAGAGTTA TTACCAGAGC
CAGAACTACG CCCGCGCCGT TTTGGCCTAC CAGGAAGTGA TCGAACGCTT CCAGGAAAGT
TCCAAATACC GTCCGGCCCT GCTCAAACAG GGATTGTCGT TTTATAAACT CGGCAAGACC
AAGCCCGGAC GATTGCTCTT GCAGCGAGTG ATCGACTCTG CACCGGATTC ACCCGAGGCC
GGACGAGCCG AGGCGTTTCT GGAGCAGCGC TCGAATTGA
|
|---|
| Protein sequence | MARRFLSMVI KGTCIAATGL VLSGCVISQQ DFSRLQQQVA QQGRMQRQMR QDVKSLRSSL
QQTQSQLQQK IEATSSPVRS TQANLTADMR SLQVAVAEVR GRVDALERRV DSLARTQANA
TAQLTDLTSN NTDVALPENA TQPSQLQAGP SNATNGTPAE AEAPQTFDSP QAMYDEALAQ
FRKRNYQNAQ ALWARFIDEN PKSDLVPNAY FWQGESYYQS QNYARAVLAY QEVIERFQES
SKYRPALLKQ GLSFYKLGKT KPGRLLLQRV IDSAPDSPEA GRAEAFLEQR SN
|
|---|
| |