| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0806 |
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| Symbol | |
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| ID | 8418624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 954796 |
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| End bp | 955620 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037374 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003197675 |
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| Protein GI | 258404933 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.316767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.474505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGCGG GCCTGCTTTA CAGCTTCGCC CGGCCCGGGC ACACTAAGGC CATGTCAACA
CCTACTTCTT CCCACGCCCC CGAAAGTTGC CGACTGAACA AATTTCTCGC CCAGGCCGGT
GTCTGCTCAA GGCGCAAGGC GGACACCTAT ATCGCCGCGG GCCGGGTCCA GGTGAATGGC
TCCCTCGTCA CCCAACTCGG CGTCCAGGTC CATCCCGGCC AGGATGAGGT CCGCGTCGAC
GGCCGTGTGG TCGAGCTTCC TGAAGCTCAA TCGGCCGGGC ACGACTATAT CCTGCTGCAC
AAGCCGGTGC AGGTCGTGAC CACGGCCAAG GATCCCCAGG GACGCCGAAC CGTTTTGGAT
CTCTTGCCGT CCCAGACTTT CACCAGACGC ATTTTCCCTG TTGGGCGACT GGATTTCATG
TCCGAAGGGC TCTTGTTGTT GACCTCGGAT GGAGAGTTGG CCAATCGCCT GACCCATCCG
CGGTGGCATG TAGAAAAGGT CTACGAAGTC ACGCTTCGCG AGGCGGTCAC CGAGGAGCAC
ATGAGGCAGA TGTCCTCAGG CATGCGCCTG AGCGAAGGAG AACAATTGGC CCCGGTAGAT
GTCCAAAGGC GGAAAACCGC CGCTGACACC AGCAGCCTTG AATTAACCCT GCACCAGGGG
GTGAACCGCC AAATCCGCCG CATGTGCCGC GACTTGGGGC TGACCATCCT GCGGCTCAAA
AGGATCCGCC AAGGACCGGT ACGATTGGGC AAGCTGCCCC AAGGGCATTG GCGCCATCTC
ACGGCCACTG AAATCACTAC CCTCAAAAAG CGGCTCGGAC TCTAA
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| Protein sequence | MLAGLLYSFA RPGHTKAMST PTSSHAPESC RLNKFLAQAG VCSRRKADTY IAAGRVQVNG
SLVTQLGVQV HPGQDEVRVD GRVVELPEAQ SAGHDYILLH KPVQVVTTAK DPQGRRTVLD
LLPSQTFTRR IFPVGRLDFM SEGLLLLTSD GELANRLTHP RWHVEKVYEV TLREAVTEEH
MRQMSSGMRL SEGEQLAPVD VQRRKTAADT SSLELTLHQG VNRQIRRMCR DLGLTILRLK
RIRQGPVRLG KLPQGHWRHL TATEITTLKK RLGL
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