| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0683 |
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| Symbol | |
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| ID | 8418496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 812647 |
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| End bp | 813237 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037247 |
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| Product | shikimate kinase |
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| Protein accession | YP_003197553 |
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| Protein GI | 258404811 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.47245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.517024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTA CTGAAACGCC CTCAAATATC ACCAGTCGCC CCCAGCCTGC GACAGACAGC
AGGCCTGGCT CCAACATCAT TCTCATTGGC ATGGCCGGTT CGGGAAAGAC AACGATCGGC
AAGGCCCTGG CCCATCGATT GGGCTTGGCC CATGTCGATA CCGATCACCT TCTGGAGGCC
TGGTGGGGTA TCCAATTGCA ACAATTGCGA GACCTTCTTG GGCTGGAGGG ATTTCTCGAA
GCGGAAAAGA AGTGCGTTCA GGGGCTTATC CTGGAAGACT GCGTCATTTC AACGGGAGGA
AGTGTCGTCT ACCGAGCCGA GGCCATGCGC GCCCTCCAGG CCCTGGGCCC GATCATCGGT
TTGACGGCCG GTTTCCCAGC CATTGCCGAG CGCATAGCCA GAAATCCCCA TCGTGGGCTG
GCTATTGCCG AGGGCCAGAC GCTGGAGGAC CTCTACCGCG AGCGCCAAGA CCTGTACCAG
TCCTGGAGCG ACCTTTGCAT CGCAACAGAT ACGCACCCCA TTGCCGCGTG CGTACAAACC
ATAGAGGAAT GGCTGCATGG GCAAAAAGAA GGCCCCGCAG AGCGGATTTA A
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| Protein sequence | MTTTETPSNI TSRPQPATDS RPGSNIILIG MAGSGKTTIG KALAHRLGLA HVDTDHLLEA
WWGIQLQQLR DLLGLEGFLE AEKKCVQGLI LEDCVISTGG SVVYRAEAMR ALQALGPIIG
LTAGFPAIAE RIARNPHRGL AIAEGQTLED LYRERQDLYQ SWSDLCIATD THPIAACVQT
IEEWLHGQKE GPAERI
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