| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0586 |
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| Symbol | |
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| ID | 8418398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 707734 |
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| End bp | 708516 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037154 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_003197461 |
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| Protein GI | 258404719 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAG AAGCGCTGCT CAGCCAGCAC TGGCCCTCCT TTTTGCTCTG TTTTATTCGC
GTGGCCGCGA TTATCGGCAG TATGCCGGTC TTGTCCGGAG GGCAGACCCC GGCGCGGCTC
CGGGCAGGGC TGGCCCTGGT GCTGGCGGTA ATCATCTTTC CTGCCGTTGA CGGAACAATC
CCGGACATCA ACTTTGCCCC CTTGCGGCTT TTCGTGCTGG GCAGTCAAGA GGTACTGTTG
GGGCTCATGC TCGGCTTCAT CGGCCGTCTG CTTTTTTTGG CTGCCCAATT CGGAGGCACG
ATTCTGGGAT TCCAAATGGG GTTTGCTGCG GCCAACATTT TAGACCCCCA AAGCCAACAG
CAGATCCAAC TCATGTCCCA GTTCCAGAAT GTGCTGGCAT CGCTTGTTTT CCTGGCGGTG
GATGGTCACC ATGTGTTCTT GCGTAGCTTG GCCCGTTCCT TTGAGGTCGT TCCCCCGGGT
GGTGGGTTGC ATTTGCAGGA TGCGGTGCCG AGCATGGTGG CTATGACCGG AGAGATGTTC
GTACTCGGTT TGCAACTCAC TGCCCCTATT TATGTAATTT TGATCTTATC GGATTTTATT
CTGGGGATCA TGTCCCGCAT CTTTCCGCAA CTCAACGCTT TTATGCTTAA GTTCCCCATC
AATATCGGTG TGGCCTTTTT CTTTTTGGGC CTTTCGGCGG AGTTCATCGT CAGTATTTTG
ATTTCCGAGT TTAACGGCCT TGCCCAGCGC TTGGTGGAAT TCTTCGAACT CGTGAGGCAG
TGA
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| Protein sequence | MDLEALLSQH WPSFLLCFIR VAAIIGSMPV LSGGQTPARL RAGLALVLAV IIFPAVDGTI
PDINFAPLRL FVLGSQEVLL GLMLGFIGRL LFLAAQFGGT ILGFQMGFAA ANILDPQSQQ
QIQLMSQFQN VLASLVFLAV DGHHVFLRSL ARSFEVVPPG GGLHLQDAVP SMVAMTGEMF
VLGLQLTAPI YVILILSDFI LGIMSRIFPQ LNAFMLKFPI NIGVAFFFLG LSAEFIVSIL
ISEFNGLAQR LVEFFELVRQ
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