| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0533 |
|---|
| Symbol | |
|---|
| ID | 8418341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 643005 |
|---|
| End bp | 643865 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645037097 |
|---|
| Product | electron transport complex, RnfABCDGE type, B subunit |
|---|
| Protein accession | YP_003197408 |
|---|
| Protein GI | 258404666 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
|---|
| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACCA TAACTGCGAT TTTGGCCATG GCCGGTTTGG GACTGGGCCT GAGCGCTGTG
CTCGGTGTGG CGGCCAAAGT CTTTTATGTC TACGTGGATC CGCGTATCGA ACAGGTTGCT
GACTGCCTGC CTGGAGCGAA TTGCGGGGGC TGCGGGTATG CGGGATGCAG CGACTATGCA
GCGGCGGTTG TCCGTGGCGA GGTCGAAGCC AATAAATGCA CTGCCGGCGG AGAGGCGACC
TGCACGGCCA TCTGTGAATG CCTCGGTCTC GAGGCGGCCA TGGGGGAACG GCAGATCGCC
AAGATCTTTT GCGTAGGCAC TCGCGATGCC GCGAAAAGCA AGTTCGTTTA CGACGGCATC
GAGGATTGCC GGGCTGCCGC CCGACTTGCC GGTGGGGATA AGGCATGTTC CTGGGGCTGC
CTGGGACTGG GCACCTGCGT GAAGAATTGT CCGTTTGACG CTATGTACAT GCAGGACAAC
GGACTGCCGG GAGTCGATCC CGTCAAATGT ACTGGGTGCG GCAAATGCGT TGAGATCTGC
CCGCGCGACA TCCCGAAGTT GACTCCAGAA TCCCAATCGA CCGCGTGTCT GTGTTGCTCC
CACGACATGG GCAAAGTGGT GAAAAGCGTT TGCAGTGCCG GGTGTATCGG GTGTTCCAAA
TGCAAGAAAG AGTGCCCGGA AGAGGCCATC ACCATGGACA ACTTCCTCGC AGTGGTCGAT
CCGGCAAAAT GTACCGGTTG CGGTGCCTGT ATCGAGGTCT GTCCCACGGG CGTGATGCGC
AGTTTGCTCC CGGAAGGGCA GCACCCGATG CATGCCGTTC AATCCGAAAC GGCCTCTGAA
ACCCAGGAGG AACAGGTATG A
|
|---|
| Protein sequence | MGTITAILAM AGLGLGLSAV LGVAAKVFYV YVDPRIEQVA DCLPGANCGG CGYAGCSDYA
AAVVRGEVEA NKCTAGGEAT CTAICECLGL EAAMGERQIA KIFCVGTRDA AKSKFVYDGI
EDCRAAARLA GGDKACSWGC LGLGTCVKNC PFDAMYMQDN GLPGVDPVKC TGCGKCVEIC
PRDIPKLTPE SQSTACLCCS HDMGKVVKSV CSAGCIGCSK CKKECPEEAI TMDNFLAVVD
PAKCTGCGAC IEVCPTGVMR SLLPEGQHPM HAVQSETASE TQEEQV
|
|---|
| |