| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0397 |
|---|
| Symbol | |
|---|
| ID | 8418202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 484885 |
|---|
| End bp | 485799 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 645036959 |
|---|
| Product | protein of unknown function DUF1568 |
|---|
| Protein accession | YP_003197273 |
|---|
| Protein GI | 258404531 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000164254 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.853679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTG AGGATGTGGT TGCAGCAGGT GGCAACCAGC GGGTTTTCCG GGCCAAGTAC
AAGATTAACC AACCGGGGTT TATTTCGCAC ATTACCCAGC GAGCGGCAGG AAAAGAGCCG
CTTTTTCTGG AAAAGGGAGA TTATCTGCAC TTCTTAGCGC TGCTGAAGGA GAGTGCTTCC
CGGTTTGAGT TGGGCTATTA CGCGTTTTGT CTGATGCCCA ACCATGTCCA TTTGCTGGTT
GAGCCGCACA AGCCGAACCT GGACAGTGGG ATGCACTCCC TGTTTTTTCG GTATGCCACG
TTTTTTAACC GTAAATACCA ACGCCGGGGG CATCTCTTCG GCGGGCGATA TCGCCAAGCG
CTGTGTCTTG CTCCAGATTA TTTGCTGACC GCTTCAGTCT ATATCCATCT TAACCCAGTG
CGCGCCGGAC TGACCAAGAG GGCCAGCGAC TATCCATGGT CCTCTGCGGC GGTCTATTGC
AGGCAGGCGG AGCAGGATTC CTTTCTTCTG CCCGAACGTA TATGTACTTT GGTGGCCGCA
GACCCGGATG AAGCGCGGCA GGTGTACGCT CGGTTGCTGC ACCAGGGGCG GGCAGATGCT
CCAGAGAATG CGCAGGAGCA GCCGGGGGTG ATTGAAAAAT TCTGTGATCG TCTTGGTGCC
CGTTTTCCGA AACTGTTTGG GCGGTTGCAA AGCAAGCGAG TTCTTCCTCA CGATACTTCC
ATGCCGTTGC AAGGCAGTCC TTCCCTTGAG CAGCTCCTTG CCCAGTTTCC AACTGGAAGC
GCGAGGCGTC CGGAAACGCG ACAAGCCAAG AAGTATGTTC TGGAGCAACT TGAGGCCAGA
GGGTTTCCCC GTAAAGAAAT AGCCGAACGC CTCGGTATTG CGCCGAAGAC GGTCTATAAT
CTTTTGCACT CATGA
|
|---|
| Protein sequence | MDIEDVVAAG GNQRVFRAKY KINQPGFISH ITQRAAGKEP LFLEKGDYLH FLALLKESAS
RFELGYYAFC LMPNHVHLLV EPHKPNLDSG MHSLFFRYAT FFNRKYQRRG HLFGGRYRQA
LCLAPDYLLT ASVYIHLNPV RAGLTKRASD YPWSSAAVYC RQAEQDSFLL PERICTLVAA
DPDEARQVYA RLLHQGRADA PENAQEQPGV IEKFCDRLGA RFPKLFGRLQ SKRVLPHDTS
MPLQGSPSLE QLLAQFPTGS ARRPETRQAK KYVLEQLEAR GFPRKEIAER LGIAPKTVYN
LLHS
|
|---|
| |