| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0042 |
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| Symbol | |
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| ID | 8417844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 54631 |
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| End bp | 56523 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036605 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003196922 |
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| Protein GI | 258404180 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATC CGGCGCCCCG GCCCACCCTT TTTGATGCTT TTTTGGAAAG CTACAAGAAT
TATAAGCACC AGACGGCGTT TATCTACCGG GTGGGCGACG AGCAATTCGA GGTTTCGTAT
GCAAAACTCT TCGAGGACGC GCTGCTCTTG GCCAAGGCCT TCCGGGGACA GGGAATCGTC
AAAGGGGACA AGGTCTTTCT GCTCTCGGAC AACCGGTACG CCTGGATCGT CACCGACCTG
GCCCTGATGG CCCTCGGCGC GGTCAGTGTG CCGCGCGGCA GCGACACCCC GTCGTCAGAA
CTCGCCTATA TCCTGGACCA TTCGGAATGC GCCTATCTGA TCCTGGAAAC CGAGGGGCTT
TTCAACCAGC ACCGGGAACT CATCGAGCAG CGCGCCTTGC AAGGGGTTTT CGTCATCGCC
TCTGAACACC CTGCGGAACC AGGGATGCTG ACCTATTCCC AGCTCCTGGC CAACCGGAGT
TTGAGCCTTG AGGATTTGCG ACAGCTCATG CAGGTCAAGC GTCAGGTCGG GGGCGACGAT
CTGGTGACCA TCATCTACAC CTCGGGCACC ACCGGGACTC CCAAGGGGGT CAAGCTGACC
CACGCCAATA TCATGCACAA TGTGCAGAAT CTGCCCGACC TCATCCGGCT CACCAGCGAG
GATCGCTGGC TGTCCATCTT GCCCACCTGG CATATTTTCG AGCGGACCGT GGAGTATGTG
GCCCTGTCGC GGGGGTCGTG CATCGTTTAC TCCTCCATCC GGACCTTTGC CGCAGACCTG
GAGCGGTTCA AGCCGACCCT GGTGGCCACA GTGCCGCGTA TCTGGGAGTC GCTCTACGGC
AAGGTCAATG CCGCACTGAA AAAGGAAAGC CCCAGAAAAG CCCGGCTCTT TCAGTTTTTG
GTGAGTGTTT CGTCCTCCTT TCGGCTCAAT AGCCGGCGTA TTTCGGGACG GTTGCCGCGC
TTTGAGCATG AGCCGTGGTG GCGGGTGCTC CCACGCAAGG CCCGCGCCCT GGCTTGCGTT
GTCGCTTTGG CGCCCCTGTA TGCCGTGGCC CGGGCCAAGT TGGCCCCGGT GAAAAAGAAG
TTCGGTGGCC GGTTGCGCTT GGCTATCAGT GGCGGGGGAA GCCTGCCGCC GTTTCTTGAC
GAATGGATTG ATGCCATCGG GATACGGATC ACCAACGCCT ACGGGATGAC CGAATGCTCG
CCGGGCATTG CCGGTCGCGG TCTGGACTGC CGGACATTCG GCACCCTGGG GCCGCCCTTT
CCCTACACCG AAGTCCGCAT CGCGGGGCAG GACGACATTG AGGTCCCGAC CGGAACGGAA
GGGGAGATCC AGGTCCGCGG CCCCCAGGTT TTCCACGGCT ATTACCACAA CAATGAGGCC
AATGCCGAAT CCTTCACCCC GGACGGGTTT TTCCGCACCG GTGACCTGGG CAAAAAGACC
CTCAATGGGG AACTGGTCAT CACCGGCCGG GCCAAGGAGA TCATTGTCCT GGCCAGCGGC
GAAAATATCG ATCCCACGAA TATTGAGGCC ACCATTTCGA CCTTTCCCTT TGTCCAGGAC
GCCGTTCTCG TGGGACAAGA CAAAAAAGGC CTCGGCGCCT TGATTGTTCC GGATTTGGAA
AAGCTCCGGC AGTATGTGGC TGAGCAGTAC AACCATGTGG TGAACGAGGC CGGGGATGTT
CTCCAGGACA AGCAGATCGT GGAAAGTCTC AAGCGGGAAA TGAACAAGCT GTTGAAGCCG
AAGCGGGGCT TTAAGCCTTA TGAAAAGCTC CATTCGATCC ATTTTTTGAA CAGGGAATTC
AAGCTTGGCG AGGAATTGAC CAACACGCTG AAGAAAAAAC GGCACGTCAT TGAGCAGAAG
TATCAGGATA TTATCAATCG GCTGCTGAAG TAG
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| Protein sequence | MTNPAPRPTL FDAFLESYKN YKHQTAFIYR VGDEQFEVSY AKLFEDALLL AKAFRGQGIV
KGDKVFLLSD NRYAWIVTDL ALMALGAVSV PRGSDTPSSE LAYILDHSEC AYLILETEGL
FNQHRELIEQ RALQGVFVIA SEHPAEPGML TYSQLLANRS LSLEDLRQLM QVKRQVGGDD
LVTIIYTSGT TGTPKGVKLT HANIMHNVQN LPDLIRLTSE DRWLSILPTW HIFERTVEYV
ALSRGSCIVY SSIRTFAADL ERFKPTLVAT VPRIWESLYG KVNAALKKES PRKARLFQFL
VSVSSSFRLN SRRISGRLPR FEHEPWWRVL PRKARALACV VALAPLYAVA RAKLAPVKKK
FGGRLRLAIS GGGSLPPFLD EWIDAIGIRI TNAYGMTECS PGIAGRGLDC RTFGTLGPPF
PYTEVRIAGQ DDIEVPTGTE GEIQVRGPQV FHGYYHNNEA NAESFTPDGF FRTGDLGKKT
LNGELVITGR AKEIIVLASG ENIDPTNIEA TISTFPFVQD AVLVGQDKKG LGALIVPDLE
KLRQYVAEQY NHVVNEAGDV LQDKQIVESL KREMNKLLKP KRGFKPYEKL HSIHFLNREF
KLGEELTNTL KKKRHVIEQK YQDIINRLLK
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