| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0038 |
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| Symbol | |
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| ID | 8417840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 47020 |
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| End bp | 49443 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036601 |
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| Product | glycoside hydrolase family 57 |
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| Protein accession | YP_003196918 |
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| Protein GI | 258404176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGTT CGATTTGCAT ACATGGCCAT TTTTATCAGC CGCCGCGGGA AAATCCGTGG
CTGGAAGAAG TCGAATTGCA GGAATCGGCG CATCCGTATC ATGACTGGAA CGACCGGGTC
ACCGACGAAT GTTACGCCCC CAACACCGCA GCCCGGATCC TGGACGGCAA GCGCCGGATC
ATCGACCTGG TCAACACCTA CGCCCATATC AGTTTCAACT TCGGAGCGAC ACTGCTTTCC
TGGATGGAGC GCCACCGGCC CGAGGTTTAC GAGGCCATCC TCGAAGCTGA CCGGCAGAGC
CTGCAACGGT TTGGAGGCCA CGGTTCCGCC CTGGCCCAGG TTTACAACCA CATGATCATG
CCTCTGGCCA ATAAACGGGA CAAGGCGACC CAAGTCTATT GGGGGTTGCG GGATTTTGAG
CGCCGTTTTG ACCGCACACC AGAGGGCATG TGGCTGCCGG AGACCGCCGC AGATACAGAT
TCTTTGGATG TTCTGGCGGA GATGGGCATT CAGTTCACCA TCCTGGCTCC TTCGCAGGCC
AAGAAGGTTC GGTTGTTGGA CGAGACGTCC TGGGAGGACG TCGACGGCGG CCGTGTGGAC
CCCAAGTTCC CGTATCGATG CCATTTGCCT TCCGGGCGCT CCATCGTCGT TTTTTTCTAT
GACGGGCCGA TCTCCCAGGA TGTGGCCTTC GGCGGTCTGC TCCACAATGG CGAGGAGTTT
GCTCACCGGC TCCTGGGAGC TTTCGATCCC AAGGAAGAAA ACGGCCAGCT GGTGCATATC
GCCACTGACG GCGAGACCTA CGGCCACCAC CACCGTCTGG GGGATATGGC CCTGGCCTAT
TGTCTGCACT ACATCCGGGA GTACACCGAT ACCGAGGTCA CGATTTACGG GGCCCATTTG
GCCCAGCACC CTCCGCAGCG CGAGGCAATG ATCAAGGAGC AGAGTTCCTG GAGCTGCGTC
CACGGTGTGG AACGGTGGCG GGGGAATTGC GGCTGCCACA GCGGTCTTAA CCCCGGGTGG
CAGCAAAAAT GGCGTAAACC CTTGCGCCAA GGCCTGGACT GGGTCCGGGA CAGCGTCGCT
CCTGTGTACG CCGCAGAGGC CTCCCGGATT TTTCTTGATC CCTGGCAGGC CAGAGACGCG
TATATCGAGC GGCTTTTCGA CAAGGACTGG GACGCCACGG CTGTGTTTCT TGAAGAGCAG
GCCGGGCGGA TTCTGACCCA GCAGGAACGG GTCCAGGCCT TGAAATTGCT GGAAATGCAG
CGCTACGCCA TGCTCATGTA TGCGAGCTGC GGTTGGTTTT TCGATGAGAT TTCAGGCATC
GAGACGACCC AGATTTTGAT GTACGCCGAC CGTGTGCTCC AATTGGCTGA GGAGACCGCG
GGGCTGGATC TTGAGAACGG ATTCCTGGAA TATCTCGAGC AGGCCCCCTC CAACGTGCTC
GCCTACGGTC ACGGCGCGGA GGTCTTCCGT CGCCTGGTCG CTCCAGCCAA GCTCGATTTG
CTCCGCGTTG GGGCCCATTA CGCCATTTCG TCCCTGTTCG AGTCTGATCT CGAGCAGATT
CGCATTTATT GCTATTCCGT GCAGTGCGAA GATTTCCAGC GGCAGGAGGC CGGGGCTCTC
AAGCTCGGCA CGGGCCGGGC ACGTATTGTG GCCGAGATCA CCGGGGAAAG CGCGTCTTTC
GGGTTCGCCG CCCTGCACCT AGGGGACCAC AATGTCATCG CCGGGATTCG GCAGGCCCGT
GAGAGCGGTG ACTTCGAAGC CATGCGCAAG GATCTGGGCG CCGCATTCAG TCGCAGTGAT
GTCCCGGAAT TGGTGCGGAG CATGGATGCC CATTTTGAGG ACCGCTATAC CTTGTGGCAC
CTGTTCAAGG ATCCGCAGCA AAAGGTCCTG GATGAGATCA TGCGAGCCAC CCTGGACGAG
GTCGGGGTCA ATTTGCGGCA GATTGTGGAC GCCAATTACA CCTTGATCAA TTTCTTGCGC
GATATGCCCC GACCGTTGCC CAAACCCCTT GCCGTATCCG CGGAATATGT TCTCAATGAG
GATCTGCGGT GGATCCTGGA GCAGGATCTG CCCGATCTGG AGCGGTTCGA GGAACTGGTA
CAGCAAATGC AACGCTGGGA GATCCCTTTG GCCAGACAGG ATTTGCGCTA TCGGGCAAGC
TGGCGGATCG GGGCCCTTTT CGAGCGTTTG CGCGAAAAGC CGCAGGACAC CGTTTTACTG
ACCGATATTG AACGGTTGAT CCGTCTGTTG CGCGAACTCG GCCTTCAGGT CGATCTGTGG
AAAGCGCAGA ATGTCTATTT CTCTTTGACC CAGGATTGGC TGGAGGCCAT GCGCCAGCGG
GTTCAGGATG GTGAACCGGA GGCGAAGTCC TGGGTCGCGG TGGTCGAGCG GCTGGGCGGA
TTGCTGGAGG TGTGCGCCGC ATGA
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| Protein sequence | MSGSICIHGH FYQPPRENPW LEEVELQESA HPYHDWNDRV TDECYAPNTA ARILDGKRRI
IDLVNTYAHI SFNFGATLLS WMERHRPEVY EAILEADRQS LQRFGGHGSA LAQVYNHMIM
PLANKRDKAT QVYWGLRDFE RRFDRTPEGM WLPETAADTD SLDVLAEMGI QFTILAPSQA
KKVRLLDETS WEDVDGGRVD PKFPYRCHLP SGRSIVVFFY DGPISQDVAF GGLLHNGEEF
AHRLLGAFDP KEENGQLVHI ATDGETYGHH HRLGDMALAY CLHYIREYTD TEVTIYGAHL
AQHPPQREAM IKEQSSWSCV HGVERWRGNC GCHSGLNPGW QQKWRKPLRQ GLDWVRDSVA
PVYAAEASRI FLDPWQARDA YIERLFDKDW DATAVFLEEQ AGRILTQQER VQALKLLEMQ
RYAMLMYASC GWFFDEISGI ETTQILMYAD RVLQLAEETA GLDLENGFLE YLEQAPSNVL
AYGHGAEVFR RLVAPAKLDL LRVGAHYAIS SLFESDLEQI RIYCYSVQCE DFQRQEAGAL
KLGTGRARIV AEITGESASF GFAALHLGDH NVIAGIRQAR ESGDFEAMRK DLGAAFSRSD
VPELVRSMDA HFEDRYTLWH LFKDPQQKVL DEIMRATLDE VGVNLRQIVD ANYTLINFLR
DMPRPLPKPL AVSAEYVLNE DLRWILEQDL PDLERFEELV QQMQRWEIPL ARQDLRYRAS
WRIGALFERL REKPQDTVLL TDIERLIRLL RELGLQVDLW KAQNVYFSLT QDWLEAMRQR
VQDGEPEAKS WVAVVERLGG LLEVCAA
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