Gene Dtox_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2012 
Symbol 
ID8428994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2179282 
End bp2180073 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content45% 
IMG OID645034339 
ProductMethyltransferase type 11 
Protein accessionYP_003191470 
Protein GI258515248 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000802206 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.20097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGT GGAATGCAGG GGATTACAGC AGAAGCTCAT CCGAACAAGA AAAATGGGCA 
ACGGAATTAA TTGCAAAACT TAAATTAAGG GGCGATGAAA GGATTTTGGA TATTGGCTGC
GGTGACGGTA AAGTCACAGC GGCCATAGCC CGACTACTCA CAGAGGGCTC CGTCCTGGGC
ATAGACAGTT CTCCGGAAAT GATTTTTTTC GCCTGTCAGA CAAGAGGGTG TGATACAAAT
AAGAATCTCT CATTTCTGAA GATAGATGCC AGAGAGCTGG ACTTTCAGCC TGAATTTGAT
GTTGTATTTT CTAATGCAGC TCTTCACTGG ACAACGGAGC ATTTGAAGGT TTTGCAAGGA
ATCAAAAAGT GTTTGCGGCC ATTTGGAAAA GTATTGCTGC AAATGGGAGG CAGGGGTAAT
ACTGAGGCCA TGCTGACAGT TGTTTCAACA ATTATGGGCA AGTCAAAATG GAGCGAGTAT
TTTACCAATT TCTCATTTAA ATACGGTTTT TATGGCCCCG AAGAATATCT GGCCTGGCTG
GAAATGGCCG GTCTTAATGC AATTAGAGTA GAGCTGATTC CCAAGGATAT GGTACACGGG
GGGGAAGAGG GTTTGGCGGC CTGGTTCAGG ACTACCTGGC TTCCTTATAT TCAGGCAGTA
CCGCAGCACT TGCAGGAAGA GTTTATATAT GAAGCGGTAA AGACATATAT AGGTAAATAT
CCGCTAGATA CACAGGGCCG GGCTCATGTG CAAATGATGC GGCTGGAAGT TGAGGCGCAG
AATATTCAAT AG
 
Protein sequence
MFKWNAGDYS RSSSEQEKWA TELIAKLKLR GDERILDIGC GDGKVTAAIA RLLTEGSVLG 
IDSSPEMIFF ACQTRGCDTN KNLSFLKIDA RELDFQPEFD VVFSNAALHW TTEHLKVLQG
IKKCLRPFGK VLLQMGGRGN TEAMLTVVST IMGKSKWSEY FTNFSFKYGF YGPEEYLAWL
EMAGLNAIRV ELIPKDMVHG GEEGLAAWFR TTWLPYIQAV PQHLQEEFIY EAVKTYIGKY
PLDTQGRAHV QMMRLEVEAQ NIQ