Gene Dtox_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0251 
Symbol 
ID8427175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp269023 
End bp270522 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content42% 
IMG OID645032638 
Productlysyl-tRNA synthetase 
Protein accessionYP_003189827 
Protein GI258513605 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000260184 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.314985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTATCG AAGAAGAACT AAGTTCCGCA GAAAATCTCA ATGAATTAAG TGAATTAATG 
CGTGTGCGCA GGGAAAAACT GCAGGAACTG ATTGATAAGG GTTATCATCC CTACGGGGAC
AAATACGATC GGCTTCATTG CTCAGCAGAG ATTATAAACA ATTTCGAGCA GTATGAAGGG
CAGGAAGTTT CTGTTGCCGG CCGTCTGATG GCTAAGCGGG GTCATGGGAA GGCTGGGTTT
GCTAATTTGC AGGATACTGC CGGAAGTATC CAGGTATATG GTAGGCTGAA TAACCTTGGT
TCAGAAGATT ACGAGCTCTT TCAAAAGTTG GATATTGGAG ACATAATAGG TGTTAAAGGT
AAGGTTTTTA GAACACAGAA GGGTGAAATC ACGGTTGAGA TACAGGTCTT GACCTTACTT
TCTAAATCTC TTAGGCCTTT GCCCGAAAAA TGGCATGGCC TAAGAGATGT AGAGCTGCGA
TACAGACAGC GGTACGTGGA TTTAATAGTT AACCCGGAAG TTAAAAATCA GTTTGTAGCA
AGGAGTCAGA TAGTTCGTTG TATTCGTAAT CTATTGGATG AAAAGGGTTT TCTAGAGGTG
GAGACCCCGA TGATGCAGTC AATTGCCGGT GGTGCTGCCG CACGTCCTTT TATTACCCAT
CATAATGCGC TTGATATGGA ACTTTATTTG CGCATAGCTC CTGAATTATA CTTGAAAAGA
CTTTTAGTTG GTGGTTTTGA TAAAGTGTAT GAAATAAACC GCAACTTTCG CAATGAAGGT
ATTTCTACCA AGCATAATCC TGAGTTTACT ATGTTGGAGC TTTACCAGGC TTATGCTGAT
TATTATGACA TGATGGAGAT GGCCGAATAT TTAGTGTATA ACACTTCTTT AAGAGTGAAC
GGGACTCCTG TTATTAGTTA TCAGGAGCAG GAGATCAATC TAGTTCCTCC CTGGAATAGA
ATGCCCATGC TAGAGGCAGT GAAAAAATAC AGTGGTTTGG ATTTTTCCAT GCTCAAGTCT
GATCAGGAAG CAGTTAAAGC AGCGCAGGGC CTGGGATTAG GTGTGGTGCA GCCTTCCGAT
ACCTGGGGAG AAGTTTTAAA TAAAGTTTTC GAGGAAATGG TGGAGCCTAA ACTAATTCAA
CCAACTTTTA TTATTGATTA TCCGGTAGAG ATATCACCGT TGGCTAAGAA AAAAGATGAT
GATGCCAGTC TTACCTATCG TTTTGAACTT TTCATATATG GCAGGGAAAT GGCCAATGCA
TTTTCTGAGT TAAATGATCC TATTGATCAG AAAGCCAGAT TTCAAAAGCA AGTTGAACAA
AGACGCAGTG GTGATGATGA GGCTCATATG ATGGATGAAG ATTATATCCA AGCCCTGGAG
TATGGAATGC CCCCGGCTGG GGGGCTTGGT ATAGGTATAG ATCGCCTGGT TATGCTTTTA
ACTAATGCTG CCTCAATCAG GGATATTATT CTTTTTCCAT TACTAAAGCC ACGAGAGTAG
 
Protein sequence
MSIEEELSSA ENLNELSELM RVRREKLQEL IDKGYHPYGD KYDRLHCSAE IINNFEQYEG 
QEVSVAGRLM AKRGHGKAGF ANLQDTAGSI QVYGRLNNLG SEDYELFQKL DIGDIIGVKG
KVFRTQKGEI TVEIQVLTLL SKSLRPLPEK WHGLRDVELR YRQRYVDLIV NPEVKNQFVA
RSQIVRCIRN LLDEKGFLEV ETPMMQSIAG GAAARPFITH HNALDMELYL RIAPELYLKR
LLVGGFDKVY EINRNFRNEG ISTKHNPEFT MLELYQAYAD YYDMMEMAEY LVYNTSLRVN
GTPVISYQEQ EINLVPPWNR MPMLEAVKKY SGLDFSMLKS DQEAVKAAQG LGLGVVQPSD
TWGEVLNKVF EEMVEPKLIQ PTFIIDYPVE ISPLAKKKDD DASLTYRFEL FIYGREMANA
FSELNDPIDQ KARFQKQVEQ RRSGDDEAHM MDEDYIQALE YGMPPAGGLG IGIDRLVMLL
TNAASIRDII LFPLLKPRE