Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0132 |
Symbol | |
ID | 8427055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 143549 |
End bp | 150598 |
Gene Length | 7050 bp |
Protein Length | 2349 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645032527 |
Product | YD repeat protein |
Protein accession | YP_003189717 |
Protein GI | 258513495 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGGGG GTCTAAAATT GGGGGGAAAA TATTATATAC CAAAACCTTC TTCAAGGATT AAGAAATGCA TCTGTTGTGT CTTAACAATA ATAATGCTGC TAATTTCAAA TACCGGTTTT ATCCCGAATT ACTATATCAC AAATAATGCA AAAGCTATGA GCCTACCGAA TAACTCACAG ACATCAATTG CCTCAGGGAA CTCAAACAAC GAATCTCCAA GTGACAATAT GACCAATCAG TCAGAAATGG AAACTTCCGC ACAAAATAAT AGTGTCACCG GAGATGTTTA TGTTGAGCAA AAAATATTCA CAAGCGACTC ATTGATGTTT ACACCCTTTA ATTCTCAAAA AGCTCTGACT GAAAGAGTAT ACTCGGATAA TCCTGATTAC ATCAATAAGG TGATAAACTA TTCCGAAATC CCGAACACAT TTCAATCAAC CGGCGAGTAT GTTTACCAGT CAGGCGACAT CCATATGCAG CAGGTCATTC ATATGCCAAA GATGATTAGA AATCCAGATG TCTTAAATCT ATCAACATTA AACCAAAACA GCAATAACTA TAGCGTTGAC AATTCTGTTT ATGGAAACAA TAATTGTTCT GACATTGCCG ATTCAAGTAC TAATGCTCCA TCTGCTGCAT CAGCAAGTCT TACCAATACT TTAGCAATCA CCGAATTTAA AGATGGTATA AACGAAGACG ACCTAAACCT CATTGATTCC GATTCGGCGG TAAGCTCAAA CAGGAGCAGT TCCAGCGTTG CCAGTTCTGT ATATAACAAC CAAGAAGATT TAACATCCCA AGATTTGAGT AGTGCAAGCG TTGCCTCAAG TGTATATTCA ACAGATATTA GCCTGGATGC ATCTTTGCCC ATCCAAAATA AATCCGGCCA TTTTACTGTT GGCTTTTCAC ACAAGACGGG CAATAACCTT TTGCGGTTTT CATACAAGAA TGCAGATTTG ATGCTAAACC CACGTAATTC AGCCGCCACT TCCGGCAGCA TCCATAAAAA CAGCATCTCT TATCAGGAGA TTTACCCTGC CACAGATCTG AAATACACAG TAGAGCCGAA TAATCTCAAG GAAGAACTCA TTATTAAAAA ATATACCGGA CAGACCGACT TTTATTTTCA ATTAAGCGTA AACAATGCTG TTTACAAAAT AACACCGGAC TCAACCATTC TTTTCTGTGA TCCCACATCA GGTCAGACAC TCTTCTATAT GCCCAGGCCG TTTGCCATCG ACAATGCTGC TAACAATGAC ATCTATCATC TGCCGGAGTT TAATAACTCT GATGGTAAAA ATAGTACATC CAAGAATCTG CCTGCTTTTT ACCAACTATC TGGCCACAAG AGCTGCGATC TTAGTTATGA GATTAGCAAA GATGGGATAC TCAAGGTATC AATAGATCCA GACTGGCTTA AAAACGCCAT CTACCCTGTA ATTATAGACC CCAGTATTTA CATTTTTGAT GCTGGCTTTT ACCGTGCATC AATAGCTTAC AACATGGAAG GCATTCAAGT GGGGAACGGT GTTCCCCGGT ATGAGCAAGC CAGGTTCAAC CAGGGAATCT TAGTAGAAGA AGGAACAACT AATCTTTTAA CCGTTAACCA AAGCAATATT GAAACCTCGC TGGATCCAGG CTGTGTTGCT GATGGAACAG GTGTAACAGT ATCAAAGATT ACTTCACAGG CATGGGAGGG AGCCGCTTCC ATTCAAGCTA GCTGTGCATC GGGCGGAAAT TCTTATAATG GCGTAAATAT ATGGAAAGGA GCGCAGGGCA CGGGCTGGGC AGTAACAGCA GGACAGGCCT ATACCGCTTC GTTATACGCA AAAGGTGCAA ACGGTGGAGA ACCTTTCTTA TTCGCATTGT ATGCAAGTGA TTTGACACAA TTGGCAACTG TCACCGGAAC ATTAACAACT TCATGGCAAC GATTTAGTGT AACAGTAAGC ATTCCAACCG GCAAAACCGC TGTTTTTATG ATTGCCCGTA GAAATAACAC AACGAATGCT GTTACTTATT ATCTAGACGG ACTCCAGCTC GAACAGAAAA GCTGTGTCAC CTCATGGATC ACCGGCGGTA CCACCCGTTC GGGAGAAATC TTATCCATAC CGACTGCGAA CGTGTTCACC AAGGGTAACT GGTCTGTAGA ACTAACTTAT AAACCAACTA AAATAACAGG TAGTTCTCAG ATATTATGGT ATGGATACAA TCCTTCCAGT CAGGAAATAT ACATGTTATG TGTCGATCCC AATTACGGTG GAACCCTCGA TCTCGTGGTA TGCTCTAAGG CAAGTGGAAC AATGTACACT TATGGCATAG TGTCAACATT CACACTATCC TCGGGTACTT ATTACAATAT TATGGCAACT GGTAATGGCT CAACTTTGAA TTTATACTGT AATGGCCAGT TGGCTGGCTC TGCCCCATAT ATGGAAACTG TAGGGGTCCT GCCGCCCGTA ATGGGCATCG GCTGCAGGAG CTATATCAAT AACAGCACGC TCTATTATGG ATCCCAGGCA AACGGCATCA TTGACGACCT GCGCATCTCC AACCGCGCCC GCACCGCTAC CGAAGCCCTA GCCGCCTACC AGAGCAACCA GTCCCTGCCC GTGGATGCAT ACACCACCTG CAAACTGAGT TTTGACGGAG CCGTAAGCTA TTATGCTACC GATCAGACGG GTGCCGGCAT TGAGTCCTAC TGGCACTACG CCGGAATGAA CCTAGGTGGG GGCTGGAACG CCTCAGTAAA CACCTGGAAC CGGAATCTTG TGCTTAGCAA GCAGTTATTT TCCATACCGG GTAGAGGCAT CAGCACCGGT GAAAACATCA TCTATAATTC ACTTACCAAC AAAACCTGGA TGTTAGGCAA TTTTACAGGA ATATTCGAGA ACCAGGACGG AAGTGTTACC TATACTAAAG GCGACGGTAG TTCTTACACC TTCACCCTGA ACGGGAGCGG GGGGTACACC GCCCCGCTTG GAATCTACCT TTCTTTGATC AAGAACGGCT CAGGTAACTT TACCATCCAG GACAAATACA AAAATATATT TAAATACATC AATAACAAAC CATATCAGTT CATCGACAGA AATAACAACA TTACTACCTT TAGCTACGAC TCCAGCGGTC GGCTGTACCA GGTGATCGAT GCTTCAGGGC GGCCAATTAC CTACACCTAC GATCCTGTAG GTCGTATCGT TAATGTGATT GACCCTGGAG GCCATGCCTA CCAGTTCGGC TACCAGAACA ACTTGACCTC AGTGACCGAC CCGGCCAACA ATACCTATGT GCTAAGCTAT GATGCTAACG GGCACCTGGC TTCCTTTACC GATCCCTTGA ACAGAGTAAC GACTTTCAAT ATAAACTCCG GCGGCCAGTT GCTGAGTTAT AACGACGCCC GAACCAACGG CCAGGATGTC TATACAACAA CCTTTAGCCA CTCCCTTCAG GGCAACACAA TGGTCACCAC TATCACCGAC CCAGGCAGCA GGACAAACAC CTACTATCAT AATACCAGTA CCGGAAACCT TATCAAAAAA CAGGATGGAA TTGGCAATAC CTGGAGCTAT ACCTGGACGA ACAACAACCT CACCCAAGCT CAAGACACCA AAGGCACAAC AAGCTATCAG TATGACAACA TGGGCAATAT GATCCAGAAG ACGATTACCG TGGACAGCAA CCCTGCGAAC AATATCGTCG AGACTATGAC CTACAATAGC AACAGTGAGC TTCTGACGAG AAAGGACAAC AGCAACTATA ACAACAATAA CGGCCGAGAA ATCAATTACA AATACAGCAG CGAAGGAAAC CTGCTCTCCA CATCCGATCC TAACGAAAAG GTATCAAGCA GCTATAGTTA CGACCAGCGT GGTAATATCA TCCAATATAA CCCTGATGTA TTGGGATACC ACAATCTAAT CTTAAACGGC AGCATGGAGA TGGTTGGCAC TAATGGCAAC CTACCCGCCA ACTGGGACAT GAACGGGAGC GCCACTGTGA GCCTTGATAA TTCTTTCCAT CCACATGGCA ACTACTCGCT CAAAATCAGC AATACCACTA CACCACACTG TTATTTTAGA CAGGATATAA ATAACACTAG CTTTAACTCA GATGCACTAA CATTGAGAGC AGAGGTTAAA CTTAACAACG TCACAGGCGG CATTAGTTCT GATGGTGAAG AACCATTTGG AGAAGATAGC AGCAGCGGCT TAAAAATTGG CTTTCTGTTC CATGACGATT ACGGCAACTA TGCATATGTG TACACAGTAT GTACCGGTTC CGGTAGAACC ACGATTACCC TGCCGACCAC AGTACCGTTT CTCCCTAATC CGCCCTACCA CGGCCTGCTA TATCATGTGC AGGTCTTTAT GGGATTGAAC AATTCAAGCG GTACCGCCTG GCTTGACGGA GTGCAACTCC TGTGCAAGTG CAACGGTAGT CAAGAGCATA TCATAACTCA ATTCAACTCC GTGGAAAACA ACAGTTTTGA AGGCAGCTTG AACAATTGGA TCCCCGGAGG TGCCGCTACT GTTAACAGCA GCTTTTCCTG GGGGGGTTCC TACTCATTGA AAATGACTGC GGCGGGAACC ACCTACCAGG ATGTTCCCAC CTACGCTGGA GAGCCGCTAA CCTTATCCGG CATGATCAAC ACCAGCGGTA TCAGCGGCAG TGGTGCCTGC TATCGGATCG ACTACTATGA TGCCTCGAAC AACCTTATCT CCGGGGCTTC CGTACAAACT GGCTATATCA GCGGAACTCA GGGCTGGACA AGAATGGCAA GTATGGCCAA TGCCCCCGCA AATGCCAACC ACGCCCGAAT CCAGTGCATC CTAAACGGCA ACGGTACGGT CTATTTTGAT GATGTAAAGT TGATACCCAT AAACAGCATG CAATATAATT ATGATAAGCC CAGTGACTAT AGTAATCCCG GCAGCTATAC CGGGGGAAAC TACATGACTC TTTCTGAAGA TGCCCTGGGT ATTCAGAATG CATACGCTTA CAATCCGAAT GTTGGTAACA CGGTAGGACA CGCCGATCCT CTAAACCATA TTACCTGGTA TTACTATGAT GCTCTGAACC GTCTCATCCA AGTAACAGAT CCCTTAAGTC GTAAGGCTTA TTACCAGTAC GATCCCGTAA GCAACCTGAT TTATACACGC GACCCCAGGA GCGCGTCGTC ATCGGACAAC ACATACAGCA CATTCTACGG GCCAAACAAC CTGAACCGGC TTTCTGCCCT GACCGATTCA CAGAACCAGA GCGCTACCTA TACCTATGAC AGATCCGGCA ACCTGACGGG AATTGCCTTG CCCAACGGCC AAAGTGAGAG CCTGGAATAT GACAACGCCA ACCGTCTGAC CAGAATTATA CTAAGTGATG GCAAATACTA TAACTATTAC TATGACGGAG CCGGTGAACT GATCAGCGTT ACAGATCAAA ACGGAGCCGG CTGTTCATGG AACTACGACG GAGCACATAG GGTGACGAGT ACAACAGATC CCTTCGGCTA TCAGCTTAAC TACTCCTTAG ATAAAAGCAA CAACCTTGAG TTGGAATCTG GTATTGATTA CAGTTGCCAC TACTATTACG ACGGTGGCAA TAATATGTAC AAACTATATC TACCCGGTGC AATAATCTAC TATGGCCGAG ATGACCAAGG GCGTGTTTTT AACGTTGAGT ATAACCCGTC CTACACCGTT AATCACCAAC TGCATTACGC CACCAGCCAA AGAATAATCA ACTATCTGGT CAACGGCTGG TGCAGCAGTA TCCAGGATCA ATACTTCCCC TATCGAACCG GTTACTCCTA CGGTTACTAT GCTGACGGTA CTATTTCCGG TTACAGCTCG TGGAACGGCA CACACAGTTT CAGCTATGAT GCTGACGGAA GGCTTGCCTC CTGGACACAC AGCGGAGTCC AACAAAATTA CACATATGAT GCCGCCGGCA ACCTCCTGAC CAAAGGAAAC AGGACATTTG CCTACAACAA CATCAACGAG ATCACGAGTC CGGGCTTCAC CTACGATCAA AACGGCAACA TGACCGGCGA CGGCAGCTTC AATTATACCT ACAACCCCTT GAATCAGCTC GTCCGGGTTA ATAAGGTATC CGACGGAAGC CTTGTGGCCA CCTATACCTA CAACCACGAC GGCACCAGGA GAAATAAAGT TACCGCTCAA GGAACAACCA ACTACAACTG GGATGCCTCC GGGAACTTAA TCAGGGAAAT CGGCCCTAAT GGTACCTATT GTTACTACTA TGCCTTGGGC AAACTAATCG CCTTCGAGAA TAACCATCAG TTGTATATAG TGCACGATAA CCTGCGGGGC GATGTCATCA GCTTATCAAT GACGGATGAC TACGGAAACA CAGATCAGGA AAACAGGTAT GACTACGACC CATGGGGCAC TCCTATCTGC GAGGATGAAT CGGTAAAGTT ACCCTTCCGC TATGCCGGTT ATTACTATGA CGAGGAGACG GGGTTGTATT ATCTAAAGAG CAGGTACTAT AGCCCGGCGT TGGGGAGATT TTTGACGAGG GATGATCATA GTTTCATAAA TCATGCTGAT CCACAGACGC TTAATTTATA TGCTTATTGT GGGAATAATC CGGTGAATTA TGTGGACCCA GATGGTAATA CGATAGATGA TATTAAATCT GGTTTAAGGA ATGCAGGTAA TGCTGTTTAT AATGAAGCAC GAACTTGGGC AGATGCTTGG CTAGATTGTC CTTTTACTGG AGGGGCAGTA TTTACAGGTG GAATTGGAAT AATTAAAAGA ATTAAGGGCG TGGGGAATTT TAAAAAATAT TCGCCTGCAC AAATAGAAAA AAATTATGGG TTAAAGAAAG GACAGTTTCA TAGAGAGATC AAAGGCGATA TCCTGTCAGA TTTAACAGGC AAAAACTCGC CCTATAAAGA TCAGATGAAA AAGATGGGTA ACAATCCTGA TGTTTATTTA ACACCTGATG GACAAATACA GATTGTTTCA ACACAATTTA AAGGTAACTC ATTTAAGACA GATTTAAATA TCAAGGGTTT TTTACCCTAG
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Protein sequence | MLGGLKLGGK YYIPKPSSRI KKCICCVLTI IMLLISNTGF IPNYYITNNA KAMSLPNNSQ TSIASGNSNN ESPSDNMTNQ SEMETSAQNN SVTGDVYVEQ KIFTSDSLMF TPFNSQKALT ERVYSDNPDY INKVINYSEI PNTFQSTGEY VYQSGDIHMQ QVIHMPKMIR NPDVLNLSTL NQNSNNYSVD NSVYGNNNCS DIADSSTNAP SAASASLTNT LAITEFKDGI NEDDLNLIDS DSAVSSNRSS SSVASSVYNN QEDLTSQDLS SASVASSVYS TDISLDASLP IQNKSGHFTV GFSHKTGNNL LRFSYKNADL MLNPRNSAAT SGSIHKNSIS YQEIYPATDL KYTVEPNNLK EELIIKKYTG QTDFYFQLSV NNAVYKITPD STILFCDPTS GQTLFYMPRP FAIDNAANND IYHLPEFNNS DGKNSTSKNL PAFYQLSGHK SCDLSYEISK DGILKVSIDP DWLKNAIYPV IIDPSIYIFD AGFYRASIAY NMEGIQVGNG VPRYEQARFN QGILVEEGTT NLLTVNQSNI ETSLDPGCVA DGTGVTVSKI TSQAWEGAAS IQASCASGGN SYNGVNIWKG AQGTGWAVTA GQAYTASLYA KGANGGEPFL FALYASDLTQ LATVTGTLTT SWQRFSVTVS IPTGKTAVFM IARRNNTTNA VTYYLDGLQL EQKSCVTSWI TGGTTRSGEI LSIPTANVFT KGNWSVELTY KPTKITGSSQ ILWYGYNPSS QEIYMLCVDP NYGGTLDLVV CSKASGTMYT YGIVSTFTLS SGTYYNIMAT GNGSTLNLYC NGQLAGSAPY METVGVLPPV MGIGCRSYIN NSTLYYGSQA NGIIDDLRIS NRARTATEAL AAYQSNQSLP VDAYTTCKLS FDGAVSYYAT DQTGAGIESY WHYAGMNLGG GWNASVNTWN RNLVLSKQLF SIPGRGISTG ENIIYNSLTN KTWMLGNFTG IFENQDGSVT YTKGDGSSYT FTLNGSGGYT APLGIYLSLI KNGSGNFTIQ DKYKNIFKYI NNKPYQFIDR NNNITTFSYD SSGRLYQVID ASGRPITYTY DPVGRIVNVI DPGGHAYQFG YQNNLTSVTD PANNTYVLSY DANGHLASFT DPLNRVTTFN INSGGQLLSY NDARTNGQDV YTTTFSHSLQ GNTMVTTITD PGSRTNTYYH NTSTGNLIKK QDGIGNTWSY TWTNNNLTQA QDTKGTTSYQ YDNMGNMIQK TITVDSNPAN NIVETMTYNS NSELLTRKDN SNYNNNNGRE INYKYSSEGN LLSTSDPNEK VSSSYSYDQR GNIIQYNPDV LGYHNLILNG SMEMVGTNGN LPANWDMNGS ATVSLDNSFH PHGNYSLKIS NTTTPHCYFR QDINNTSFNS DALTLRAEVK LNNVTGGISS DGEEPFGEDS SSGLKIGFLF HDDYGNYAYV YTVCTGSGRT TITLPTTVPF LPNPPYHGLL YHVQVFMGLN NSSGTAWLDG VQLLCKCNGS QEHIITQFNS VENNSFEGSL NNWIPGGAAT VNSSFSWGGS YSLKMTAAGT TYQDVPTYAG EPLTLSGMIN TSGISGSGAC YRIDYYDASN NLISGASVQT GYISGTQGWT RMASMANAPA NANHARIQCI LNGNGTVYFD DVKLIPINSM QYNYDKPSDY SNPGSYTGGN YMTLSEDALG IQNAYAYNPN VGNTVGHADP LNHITWYYYD ALNRLIQVTD PLSRKAYYQY DPVSNLIYTR DPRSASSSDN TYSTFYGPNN LNRLSALTDS QNQSATYTYD RSGNLTGIAL PNGQSESLEY DNANRLTRII LSDGKYYNYY YDGAGELISV TDQNGAGCSW NYDGAHRVTS TTDPFGYQLN YSLDKSNNLE LESGIDYSCH YYYDGGNNMY KLYLPGAIIY YGRDDQGRVF NVEYNPSYTV NHQLHYATSQ RIINYLVNGW CSSIQDQYFP YRTGYSYGYY ADGTISGYSS WNGTHSFSYD ADGRLASWTH SGVQQNYTYD AAGNLLTKGN RTFAYNNINE ITSPGFTYDQ NGNMTGDGSF NYTYNPLNQL VRVNKVSDGS LVATYTYNHD GTRRNKVTAQ GTTNYNWDAS GNLIREIGPN GTYCYYYALG KLIAFENNHQ LYIVHDNLRG DVISLSMTDD YGNTDQENRY DYDPWGTPIC EDESVKLPFR YAGYYYDEET GLYYLKSRYY SPALGRFLTR DDHSFINHAD PQTLNLYAYC GNNPVNYVDP DGNTIDDIKS GLRNAGNAVY NEARTWADAW LDCPFTGGAV FTGGIGIIKR IKGVGNFKKY SPAQIEKNYG LKKGQFHREI KGDILSDLTG KNSPYKDQMK KMGNNPDVYL TPDGQIQIVS TQFKGNSFKT DLNIKGFLP
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