| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1427 |
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| Symbol | |
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| ID | 8424934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | + |
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| Start bp | 1475936 |
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| End bp | 1480258 |
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| Gene Length | 4323 bp |
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| Protein Length | 1440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645027542 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003184842 |
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| Protein GI | 258511408 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01298] ribonuclease T
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATCG CCGAGCACGC CGTCCGGGAA CGGGCGTTGG CCAGGGTTCG AAGCGTCCGT
GTGCGCAGGG CGACCCAGGA GATCCGCGTA TACGTGGAGT CGCCCTTTGC CACCTCGGGG
TCTGACGTAG ACGCGTTCTC TTCTTTCTAT CGCGATCTCG CCGAGATCCA CGAGCTGTGC
GCCTCGGCGT TTGGCTCGTC CTGCGCATGG AACATCGAGG TGGCGCCTGC AGACGTCGTT
TCCGCGTCGG AGGCGGAGCG CGCGATGCGC GCCCTCGCCG CCGTGTACGA GGAGCGGTCT
CACGTTTCGG GCAAATGGCT GTCGCAGGCA AGATTGACGG TGGAGGCGGT GGACGAGCCG
AAGCGTTTTC GCGCCAGAAT CCGCGTCCCG AGCCAGCCGA TTGCAGATCA GCTCAAGCAG
AAGGGCGTTG CGGAGTGGCT CGCCTCGGAG GCTCGTCGCG CGTTTGGCCT GGATGTCGCG
GTCCTCGTCG AGGTGGACGA GACGGCTTGT GAGGATGTCC TTGCGGCGGG CGAGAAGCTG
AAGCAGGAGG CCGAGGCCCG TTGGCGGCGC CAGCTCGCGG AAGAGGCGAA GTCGGCCAAA
GAGCAGCCGA AAGAGCCGGA TGGACGGAAT GACACCGGCG CCGCGCAGGG GGTGGAGCCG
CTTGTCGTCG GCCAGATGTA CGACGAGCCC GCTCCCATCC CGCTGCGGGA CATCGTCGAC
GAGATGCGCC GCGCCACGGT GGTGGGCGAG GTCTTCGGCG TCGAGCGCAG GACGCTGCCG
AGCGGGCGCA CGCTCATTCA ATTTGCCATC ACGGATCACA CGGACTCCAT CTCGGCCAAG
ATATTCGTGC AGTCGGAGCG AGACCTCCAG GCCACGTCTC ATCTCGCGGA CGGCGTGTGG
GTCAAGATTC AGGGCCAGGT GCAGTTCGAC CCGTATGCCA AGGAAATGGT ATTCATGGTG
CAGTCGATGC GCCCGCACGA TGCGCCTCGG CGGATCGACA CGGCGGAGGT CAAGCGCGTC
GAGCTGCACG CTCACACCAC CATGTCGGCG CTGGATGGCG TCGTGAGCGC TGCGGCGCTG
GTGAAGCGGG CGGCGGAATG GGGGCACGAC GCCATTGCCA TCACGGATCA CGGCGTGTGC
CAGGCGTATC CGGAAGCGTA CCAGGCGGCC AAGAAGCACG GGGTGCGGCT CGTGCTCGGC
GTCGAGGCGT ACGTGGTGGA CGACGGTGGA CTTTTGGTGT ATCGAGAGTG CGATCGGCCG
CTGGACGACG AGACCGAGTA TGTCGTGTTC GACACGGAGA CGACCGGCCT CAACGCGCGG
GAGGACACGC TCATCGAGAT CGCCGCGGTG AAGGTCAAGG CGGGGCAAAT TGTGGACACG
TACGCGACGC TCATCGATCC CGAGCGATCG CTCGACCCGA AAATCGTCGA GTTGACGGGC
ATCACGAACG AGATGGTGGC CGGTCAGCCG AAACTGAGGG AGGCGCTCGA CGGATTTCGC
CAGTTCGCGC GCGGCGCCGT GCTCGTGGCC CACAACGCGG AGTTCGACGT GGGCTTTTTG
AACCAGTGCG CCGAGCGGCT GGGCCTCGAC CCATGGGAGC AACCCGTCAT TGACACCCTG
GCGCTCGCGC GCGTGCTGTA CCCGGGCGAG AAGAATTACA AGCTGAAGAC GCTCACCCAG
AAGTTCTCCG TCGATCTCGT CAACCACCAC CGGGCGCTGG CCGACAGCGA GGCGACGGCC
AAGGTGTTCG TGCACATGCT GAAAGACGCG AAGGCGCGCG GGATTCACAA CCTGCTGGAT
ATGAACCACC TCCGCGGCCA GATTGACATC TCGCGCGTTC GGCCTTTTCA CGCCACCGTG
CTCGTCCGCA ACCGCGAGGG GCTTCGGAAT CTGTATCGCC TCGTCTCCAT CGCGCACACC
CAGTACCTGC ACCGCGTGCC GCGCATTCCG AAGAGCGCGC TTGCTCGCCA TCGCGAGGGG
TTGCTCATCG GCACAGCGTG TCGGCAGGGC GAGCTCGTCG AGGCCTTCTT CCGCGGGAAA
TCCGAGGACG AGATCGACAC GTTGCTCGAG TTCTATGACT ATCTGGAGAT CCAGCCGGTC
AGTCATTACG AGCCTCTTGT GCGAGAGGGC GTCGTGGCGT CGTTCGAGCA GGTGCGCGAA
CTGCTGCGCA ACATCGTGGA GATTGGCAAG CGCCTGAACA AGCCGGTCGT GGCCACGGGC
GACGTGCATT ATCTGGACGA GCACGACGCC ATCTTCCGGG AGATCTTTCT TCAATCGCAG
AAGCTGGATA CGAAGCAGCC GCCGCTTCAC TTCCGAACGA CCGACGAGAT GCTCGAGGAG
TTCGCGTTTT TGGGGGAAGA GGACGCGCGC ACCGTCGTGA TCGACAACCC GCGCCGTCTG
GCGGCGCTGT GCGACGACGT GAAGCCGATT CCCGATGAGC TTCACACGCC GGTCATCGAA
GGGGCGGAAG ATGAAATCCG GAGGCTCGCC TACGACAAGG CGAAGCGCAT CTACGGGGAT
CCGCTGCCCG AGCTGGTCGA AAAGCGGCTG GAGCGCGAGC TCAACGCCAT CATCTCGCAC
GGCTATGCGG TCATCTACCT GATTGCGCAC AAGCTGGTCA CCAAATCGCT GAGCGATGGG
TATCTGGTCG GCAGCCGCGG CTCGGTCGGT TCGTCGCTCG TGGCCACCAT GACGGACATC
ACCGAGGTGA ATCCGCTGCC GCCGCACTAC GTGTGCTTGT CGTGTCACTA TCACGAGTTT
TTCCTGCGCG GGGAGTACGG ATCCGGCTTC GACCTCCCGG ACAAGGCGTG CCCCAACTGC
GGCGCCAAGC TGCACAAGGA CGGGCAGGAT ATCCCGTTCG AGACGTTCAT GGGCTTTGAT
GGCGACAAGG TGCCCGACAT CGACCTGAAC TTCTCCGGGG AGTATCAGCC GAGGGCGCAT
CGATACACGG AGGAGTTGTT CGGGAAGGAT CACGTGTTTC GCGCGGGCAC CATCTCCGTG
GTGGCCGAGA AGACGGCCTA CGGGTATGTG CGGAAGTTCG CCGAGGAGCG CGGGTTGGTG
CTGCGCAATG CCGAGATCGA GCGGTTGGTC CGAGGATGCA CGGGCGTGAA GCGGACCACC
GGGCAACATC CGGGCGGGCA GGTGGTGGTG CCGCACTACG TGGAGATCTA CGATTTCACG
CCGATTCAAT ACCCGGCGGA CGATACGTCG TCGGAGACGC TCACGACGCA CTTCGATTAC
CACTCCGGGC TCGAGAACTG CCTGTTGAAG CTCGACATCC TCGGCCACGA CGATCCGACT
GTGATCCGCA TGCTGCAGGA TCTCACGGGC GTCGATCCGA AGTCCATCCC GCTTGACGAT
CCCGACGTGC TGGAGCTGTT CCGAAGCACA AGGCCGCTCG GCGTGACCCC GGAGGAAATC
CGGTCGACCA CTGGCACCTA CGCCATTCCG GAGTTTGGCA CGCGCTTTGT TCGGCAGATG
CTCGAGGACA CGAGGCCCAC GACGTTCTCG GAGCTCGTGC GCATCTCCGG GCTGTCGCAC
GGCACGGACG TCTGGCTGAA CAACGCCCAG ACGCTCATCC GCGAGCAGAT TGCGACGTTG
TCCGAGGTCA TCTGCGCCCG AGACGACATC ATGCTCTACC TCATCCAGAA GGGGCTCGAT
CCGGCGCGCG CATTCAAAAT CATGGAAGGT ATCCGCAAGG GGAAGGGTGT CAAACCGGAA
GACGAGGCGT ACATGCGGGA GCACGGCGTG CCGGACTGGT ACATCGAGTC GGGCAAGAAG
ATCAAGTACA TGTTTCCGAA GGCGCACGCC GCGGCCTACG TGTTGATGGC CGTCCGAATC
GCGTGGTTCA AAGTTCACCG ACCGCTCGCG TTCTACGCGA CCTATTTCAC GGTCCGCGCG
GACGACTTCG ACGTGGCTGT GATGACGGCG GGCCGGGAGG CCATCTTAAA GAAGATCGAC
GAGATCGAGG CGAAGGGCAA CGCGGCCTCG GCCAAGGAGA AGAGCTTCCT GACGGTGCTC
GAGGTCGCGC TCGAGATGGT CGCTCGGGGA TATCGGTTTT TGCCGATTGA TCTGTACAAG
TCGCACGCGA CCCAGTTCCT CATCGAGGAG GAGGCCCGTG GCCTGAGGCC GCCCTTCGCC
GCCATTCCCG GGATTGGGGA GACGGCGGCG CGCAACCTGT ATGAAGCGGC GCAGCAGGGC
GAATTCCTGT CGCTCGAAGA TCTTCAGTCG CGGGCGCGCG CGTCCCGGGC CGTGATCGAC
GTGCTCATGG AACTCGGTTG CCTCGACGGG CTGCCGGAGA CCAATCAGCT TTCCTTGTTC
TGA
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| Protein sequence | MAIAEHAVRE RALARVRSVR VRRATQEIRV YVESPFATSG SDVDAFSSFY RDLAEIHELC
ASAFGSSCAW NIEVAPADVV SASEAERAMR ALAAVYEERS HVSGKWLSQA RLTVEAVDEP
KRFRARIRVP SQPIADQLKQ KGVAEWLASE ARRAFGLDVA VLVEVDETAC EDVLAAGEKL
KQEAEARWRR QLAEEAKSAK EQPKEPDGRN DTGAAQGVEP LVVGQMYDEP APIPLRDIVD
EMRRATVVGE VFGVERRTLP SGRTLIQFAI TDHTDSISAK IFVQSERDLQ ATSHLADGVW
VKIQGQVQFD PYAKEMVFMV QSMRPHDAPR RIDTAEVKRV ELHAHTTMSA LDGVVSAAAL
VKRAAEWGHD AIAITDHGVC QAYPEAYQAA KKHGVRLVLG VEAYVVDDGG LLVYRECDRP
LDDETEYVVF DTETTGLNAR EDTLIEIAAV KVKAGQIVDT YATLIDPERS LDPKIVELTG
ITNEMVAGQP KLREALDGFR QFARGAVLVA HNAEFDVGFL NQCAERLGLD PWEQPVIDTL
ALARVLYPGE KNYKLKTLTQ KFSVDLVNHH RALADSEATA KVFVHMLKDA KARGIHNLLD
MNHLRGQIDI SRVRPFHATV LVRNREGLRN LYRLVSIAHT QYLHRVPRIP KSALARHREG
LLIGTACRQG ELVEAFFRGK SEDEIDTLLE FYDYLEIQPV SHYEPLVREG VVASFEQVRE
LLRNIVEIGK RLNKPVVATG DVHYLDEHDA IFREIFLQSQ KLDTKQPPLH FRTTDEMLEE
FAFLGEEDAR TVVIDNPRRL AALCDDVKPI PDELHTPVIE GAEDEIRRLA YDKAKRIYGD
PLPELVEKRL ERELNAIISH GYAVIYLIAH KLVTKSLSDG YLVGSRGSVG SSLVATMTDI
TEVNPLPPHY VCLSCHYHEF FLRGEYGSGF DLPDKACPNC GAKLHKDGQD IPFETFMGFD
GDKVPDIDLN FSGEYQPRAH RYTEELFGKD HVFRAGTISV VAEKTAYGYV RKFAEERGLV
LRNAEIERLV RGCTGVKRTT GQHPGGQVVV PHYVEIYDFT PIQYPADDTS SETLTTHFDY
HSGLENCLLK LDILGHDDPT VIRMLQDLTG VDPKSIPLDD PDVLELFRST RPLGVTPEEI
RSTTGTYAIP EFGTRFVRQM LEDTRPTTFS ELVRISGLSH GTDVWLNNAQ TLIREQIATL
SEVICARDDI MLYLIQKGLD PARAFKIMEG IRKGKGVKPE DEAYMREHGV PDWYIESGKK
IKYMFPKAHA AAYVLMAVRI AWFKVHRPLA FYATYFTVRA DDFDVAVMTA GREAILKKID
EIEAKGNAAS AKEKSFLTVL EVALEMVARG YRFLPIDLYK SHATQFLIEE EARGLRPPFA
AIPGIGETAA RNLYEAAQQG EFLSLEDLQS RARASRAVID VLMELGCLDG LPETNQLSLF
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