Gene Elen_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1235 
Symbol 
ID8415526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1480422 
End bp1480775 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content62% 
IMG OID645024198 
Productribosomal protein L20 
Protein accessionYP_003181594 
Protein GI257790988 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000439682 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0943757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTG TCAAGCGCGC AGTCAGCGCC CATAAGAAGC GTCGTACCGT CCTCAATCGC 
GCCAAGGGCT ACTACGGTGC GAAGTCCCGT TCTTACCGTG CCGCGAAGGA GCAGGTGCAG
CATTCGCTCC AGTACATGTA CCGCGACCGC CGCAACAAGA AGCGCGAGAT CCGCCGTCTG
TGGATCACCC GCATCAACGC GGCCGCCCGC ATCAACGGTA TGAGCTACTC GGTGCTCATG
AACGGCCTCA AGAAGGCAGG CGTGCAGCTG GACCGCAAGG TGCTGTCCGA CATGGCCATC
AACGATCCCG CGGCGTTCAC CGCCATCACC GAGGTCGCCA AGAAGGCTCT GTAG
 
Protein sequence
MPRVKRAVSA HKKRRTVLNR AKGYYGAKSR SYRAAKEQVQ HSLQYMYRDR RNKKREIRRL 
WITRINAAAR INGMSYSVLM NGLKKAGVQL DRKVLSDMAI NDPAAFTAIT EVAKKAL