| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0984 |
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| Symbol | |
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| ID | 8415274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | + |
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| Start bp | 1191222 |
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| End bp | 1193924 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645023948 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_003181345 |
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| Protein GI | 257790739 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.583326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA CGCAGAAGAC GAAGAAGAAA CCCGCTCGGC CCACCGATCG GCGCAACATC
TGGCTGCTCA TCATCACGAC CCTGCTGGTG CTGGGGTCCG TCTTCATGTT CACGCCGCCG
CAGGAGAAGA TCAACCAGGG CCTCGACATC CAAGGCGGCC TGTCGGTGGT GCTGACGGCG
AAGAGCACCG ACGGCCAGGC CGTGTCGAAC GACGACATGG AGAAGAGCCG CGCCATCATC
GAGAGCCGCG TGAACGCGCT GGGCGCCTCG GAGGCCGTGG TGCAGGTGCA GGGCACCGAC
CAGATCCTCG TGCAGATCCC CGGCCTCACC AACACCGAGG ACGCGCTCAA CACCATCGGC
AAGACCGGCA AGCTCGAATT CGCGCGCCTC GACTCGTTCA CCGACGAGGA CGTGAAGACG
AAGATCGAGA ACGGCCAGGC CTCCGGCGAG GGCACCGTCT CCGACGATCT CGGCGTGGCC
ACGCTGCCGA CGGGCGAGAC GCAGCACCTC AAGGTGGAGG ACGGCACGTA CACGCCCATC
GTCACCGGCT CGAACATCAC GAAGGTCGAC ATCGGCAAGC GGAGCGACAC CTCCACCGAC
TACGCCGTGA ACATCTCGCT CGATTCGGCC GGCGCGGCGG CGTTCGCCGA GGCCTCGAAG
GACCTCGCGC CCACGAAGGG CAAGATCGTC ATCATCCTGG ACAACGAGGT GCAATCGGCG
CCCGCAACGC AGTCCGAGAT CCCCGACGGC AACATCCAAA TCACCGGCAA TTACTCGCTC
GACGAGGCCA AGGCGCTGCA GACCGTGCTG GAAAGCGGCT CGCTGCCCGT GAGCTTCGAG
TACGCCCAGA GCCAGACCGT CGGCCCGACG CTCGGCCAGG ACGCGCTGGC TTCCGGCGTG
CTGGTGGCCC TCATCGGGCT GGCGGTGGTC ATGCTGTACC TGCTGTTCTT CTACCGCGGC
CTCGGCGCCA TCACCGCCGC CGCCATGATC GTGTTCGCGG TGCTGTACCT GGGCATCCTG
GCCACGCTGT CGTCGTTCGG CCTGTTCAGC CTGTCGCTCG CCGGCATCGC CGGCATCGTG
CTGACTATCG GCATGGCGGC CGACTCGTCC ATCCTCACGA TGGAGCGCTT CCGCGAGGAG
ATCCGCATGG GACGCAGCGT GCGCGCCGCG TCCGTGACGG GCGTGAAGCA CGCCATCGTC
ACGTCGGTGG ACGCCGACCT CGTGACGCTC GTGTCGGCGC TGTCGCTGTT CTTCCTGGCC
AGCGCCTCGG TCAAGGGCTT CGGCCTGACG CTGGCGCTGG GCATCGTGTG CGACATCGCC
ATGATGCTGC TGTTCAAGGC GCCGCTCATC CGCGTGCTGG CGCCGAAGGT CATCGCGCGG
CACCCGGGCT TCTGGGGCAT CAAGGACAGC CTGGCCGCGT CCAAGGACTA CGCGGCGCTC
GCCGCGGCCG AGGGCACGAG CGTGGCCGCG GCCGAGGCCG GCGAGACCAT CAACCCGACC
GAGTCCGAGG AGGCCGCCGA GCGCCGCGAG GGCGCTGCCG GCGAGGCGGC CGCGAAGGCG
GCGCGCAAGC CGCGCGGCAA GTTCATCAAG CACGACATCA ACTTCCTCGG CTACCGCCGC
GTGTTCCTCG GCGTGGCCGC CGTGCTCGTG TGCGTGTCGC TGGCCATCGT GGGCGTGAAG
GGCCTGAACT TCGGCATCGA GTTCGTGGGC GGCACGTCGG TGTCGTTCCA CGGCACGGGC
GACGTGACCA CCGAGCAGAT GCGCACCGCG TTCGACCAGG CCGGCGAGCC CGATGCCGTC
GTGCAGACGA CGAACGCCGA CGGCGATGAG GGCTACCTCG TGCGCACCAC CACCACGAGC
GCCGAAGAGG CCACGCAGCG TGCGAACCAG GTGGCCGACA GCCTGGGGCT GTCCACCGAC
AGCTTCGAGG TGACCACCAT CGGGCCCGAC TGGGGCGCCA GCGTCATCCA GTCGTCGCTC
ATCGCGTTCC TCGTGTCCAT CGTGCTCATC ATCATCTACA TCGCCATCCG CTTCGAATAC
AAGATGGGCG TCACCGCCAT CGTGGCGCTG CTGCACGACC TCGTGCTGGT CATGGGCGTG
TACGCGCTCG TGGGCCGCGA GGTGAACCCG AACACCATCG CCGCGCTGCT CACCATTCTG
GGCTACTCGC TGTACGATAC GGTGGTCGTG TTCCACCGCA TCAACGACAA CATGCAGTCC
GACGACATCA AGTGCACGTT CATGACGATG GCGAACCACT CCATCAACCA GGTGCTCGTG
CGCACCATCA ACACGACGCT CACCTCGCTC ATCCCCGTGC TGGCCATGCT GCTGTTCGGC
GGCGAGACGC TCAAGGACTT CGCGTTCGCC ATGGTCATCG GCCTCGTGTG CGGCTCGTAC
TCGTCCATCG CGGTGGCGTC GCCCTTGTAC GCGATGTGGA AGACGCGCGA GCCGCGCTAC
CAGAAGCTCG TGAAGAAGTT CGGGCCCGAG GTGGGTCGCT TCGAGTTCGG CAACCCGAAC
GCGATGGCGA CGGCGCTCGC GGGCAAGAAG GCCGTCAAGG CCACGGCCGC CCCGACGGCT
GCCCCGACGG TCGGGGCCGC GGCGGAGAAG CCGACGGTCG AGGAGCCGCA CGGCGCGACC
GCCGCGAAGA GCGCGCCGAA GCCCCCGAAG GGCAAGCGCA AGAAGCGCCC CGACAAGAAG
TAA
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| Protein sequence | MAATQKTKKK PARPTDRRNI WLLIITTLLV LGSVFMFTPP QEKINQGLDI QGGLSVVLTA
KSTDGQAVSN DDMEKSRAII ESRVNALGAS EAVVQVQGTD QILVQIPGLT NTEDALNTIG
KTGKLEFARL DSFTDEDVKT KIENGQASGE GTVSDDLGVA TLPTGETQHL KVEDGTYTPI
VTGSNITKVD IGKRSDTSTD YAVNISLDSA GAAAFAEASK DLAPTKGKIV IILDNEVQSA
PATQSEIPDG NIQITGNYSL DEAKALQTVL ESGSLPVSFE YAQSQTVGPT LGQDALASGV
LVALIGLAVV MLYLLFFYRG LGAITAAAMI VFAVLYLGIL ATLSSFGLFS LSLAGIAGIV
LTIGMAADSS ILTMERFREE IRMGRSVRAA SVTGVKHAIV TSVDADLVTL VSALSLFFLA
SASVKGFGLT LALGIVCDIA MMLLFKAPLI RVLAPKVIAR HPGFWGIKDS LAASKDYAAL
AAAEGTSVAA AEAGETINPT ESEEAAERRE GAAGEAAAKA ARKPRGKFIK HDINFLGYRR
VFLGVAAVLV CVSLAIVGVK GLNFGIEFVG GTSVSFHGTG DVTTEQMRTA FDQAGEPDAV
VQTTNADGDE GYLVRTTTTS AEEATQRANQ VADSLGLSTD SFEVTTIGPD WGASVIQSSL
IAFLVSIVLI IIYIAIRFEY KMGVTAIVAL LHDLVLVMGV YALVGREVNP NTIAALLTIL
GYSLYDTVVV FHRINDNMQS DDIKCTFMTM ANHSINQVLV RTINTTLTSL IPVLAMLLFG
GETLKDFAFA MVIGLVCGSY SSIAVASPLY AMWKTREPRY QKLVKKFGPE VGRFEFGNPN
AMATALAGKK AVKATAAPTA APTVGAAAEK PTVEEPHGAT AAKSAPKPPK GKRKKRPDKK
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