| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1126 |
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| Symbol | |
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| ID | 8413999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1276292 |
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| End bp | 1277464 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022715 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_003180145 |
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| Protein GI | 257784928 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.463481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCACA CTCAAAATCA CCAACCCTTG GTTTCTCTTG TTGTGCCTAT ATATAACGTT
GCAGACTATC TGGAGCAGTG CCTGGCAAGC ATTCAATCAC AAAGCTACAC AAACCTAGAG
ATTATCTGCT TAAACGATGG CTCAACCGAC ACATCTTTAG CTCTTTTGGA AGCATACGCA
GCCCATGATG GACGCATTGT CATCATAGAC AAAGAAAACG AAGGTTACGG AGCAACATGT
AATCGTGGTA TTGCCGCAGC TCACGGCATG TGGGTAGGCA TTGTTGAACC TGACGATTAC
CTTGAGCCAA CTATGGTTCA AGAGCTTATT GATCTTATCC AAAAAAACGG CGGAGAAGAC
CAGGTAGATA TTGCACGTTC TGCGTATTGG CGCGTGTTTG GCAATCAGAA AAATGGTCGA
GCAGGAGCAA AGACACAGAT AAAGAATACT GCTGGTTCTG CCGAATACAG GATTGCCTGC
GCTTATAAAG GCCGCGTCAA ACCTAAGTAT CAACCTTGTT CTATTGATCA GATGTCACAG
CTTCTATTAC ACCATCCTGC CATTTGGACA GCACTCTATC GCAAGAAATT CTTGACCCAG
AACAACATCA ACTTCAGAGA AGTTCCTGGT GCAGGCTGGG TGGACAACCC CTTCCTCATT
GCGTCGCATT GCTGTGGTGC TCGTCTGGTG TATACAGACT CAGCACTTTA CAACTATCGC
GAGAATGGCT ATGCAGAAGC TGTCGCTTTT GCGCAGCGTC AGCCCAAAAT TCCGCTTGAA
CGTTGGAATG ACATGATGGA CGTTGTGGAC ACACGCAACA TCACCTCAAA CGTAGTGCTC
AATGCACTCA CGCTGCGTGG CATAAATTAC GCACTGCTTA CAAAAGACGC ACTTATCTGG
CGAGAAAAAC ATGATGCTGC AGGTGAGATT GACTCAGAGG CACACGATCT TCTCGCCAAG
AGCTTTGAAC GTATGGACGC AAAACGTGTT ATTGAAAACC CAGCAATCCC GGGTTCTGGG
AAAGCTTTCT TTGCGCAGAT ACGTGGTATT GCCCTACCAA AAGAAGACAA ATTTGCTCGT
TATGCTTATC TAGCCAAAGA AGGGTTCTTC CGACTCAAAA ATGATGGCAT AGTACAGACG
CTTAAATCGC TTACAGACAG ACGCGAAAGT TAA
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| Protein sequence | MSHTQNHQPL VSLVVPIYNV ADYLEQCLAS IQSQSYTNLE IICLNDGSTD TSLALLEAYA
AHDGRIVIID KENEGYGATC NRGIAAAHGM WVGIVEPDDY LEPTMVQELI DLIQKNGGED
QVDIARSAYW RVFGNQKNGR AGAKTQIKNT AGSAEYRIAC AYKGRVKPKY QPCSIDQMSQ
LLLHHPAIWT ALYRKKFLTQ NNINFREVPG AGWVDNPFLI ASHCCGARLV YTDSALYNYR
ENGYAEAVAF AQRQPKIPLE RWNDMMDVVD TRNITSNVVL NALTLRGINY ALLTKDALIW
REKHDAAGEI DSEAHDLLAK SFERMDAKRV IENPAIPGSG KAFFAQIRGI ALPKEDKFAR
YAYLAKEGFF RLKNDGIVQT LKSLTDRRES
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