| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1092 |
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| Symbol | |
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| ID | 8413965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1235500 |
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| End bp | 1236159 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022681 |
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| Product | thymidylate kinase |
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| Protein accession | YP_003180111 |
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| Protein GI | 257784894 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.733791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA ATACACGTAC ATCACAAGGC TTGTTTATTA CGCTTGAAGG CGTTGATGGT
TGCGGCAAGT CAACACAAGC TTCTCTTCTA CGAGAAGACC TTAAGGCTCT TAACTTTGAT
GTGGTCTTTG TTCGTGAGCC CGGTGGAACT GCTATTTCTG AGCAGATCAG AGATGTTGTT
CTCAATCCAA AAAACGGTGC AATGTGCGAC GAGTGTGAGC TGTTACTCTA CGAAGCAAGT
CGTGCTCAGC TAGTGGAAGA GGTTATTCGC CCAGCTCTAG CATCTGGCAA GGTAGTTTTG
TGTGATCGTT TCTATGACTC CACTTACGCC TATCAAGCAG CTGGTCGTGG CCTTGATACG
GACTTAGTCC ACCATGCAAA TCGTTTGGGA AGCTGTGGGG TTTCTCCCGA TAGAACCCTT
GTTTTTATGC TTGAGCCAAC GGTTGCTCAT GCGCGTGCTA CACAAAATGA TACTGATAGA
TTAGAAGCAG AGGGTGTTGC TTTCCAGGAA CGTGTTTTTG CTGGTTATAA GCAGCTTCTA
CAAGATGAGC CTGAGCGTGT AAAAGCTATT GATGCAGATG GCAGTATTGA CGAGGTCCGT
ACGCGTACTC GCCAGCTGTT AGCCGATCTT ATCCCGGGCA TCAGTGAGCT TGGTGAGTGA
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| Protein sequence | MSKNTRTSQG LFITLEGVDG CGKSTQASLL REDLKALNFD VVFVREPGGT AISEQIRDVV
LNPKNGAMCD ECELLLYEAS RAQLVEEVIR PALASGKVVL CDRFYDSTYA YQAAGRGLDT
DLVHHANRLG SCGVSPDRTL VFMLEPTVAH ARATQNDTDR LEAEGVAFQE RVFAGYKQLL
QDEPERVKAI DADGSIDEVR TRTRQLLADL IPGISELGE
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