Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1091 |
Symbol | |
ID | 8413964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1234323 |
End bp | 1235492 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022680 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_003180110 |
Protein GI | 257784893 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAG AGGGTACACA TACTGCTCAT ACTGCCTATT CGCTTCCTCA GGCACTAACG CGTCTTCAAG ATCAGCCTCA GGTTCAAAAC TTGCTTGCAC GAGCATTGCA TGAACACAAA CTTGGTCATG CCTATTTGTT TGTAGGTGCT CCTGGTTCTG GTAAAGGTCT TGCGGCCAAA GCTTTAGCGC AGTGTGTTCT TTGTGCCCAA GGCGGTGACG CTGCTTGTGA CGACTGCATT CGTATTTCTC GTGGCACTCA TCCTGACGTG CACGTGCTTA CTCCAGCCTC TGCAAACGGT TATCTTATTG AGCAAATTCG TCAGCTCACC GCTGATGTTA GCCTAGCTCC CATGCGATCA ACTCATAAGA TTTACGTAAT TGATCGTGCT GATTTGCTTC GAGAGAATTC AGCAAATGCG CTGCTTAAAA CTATCGAGGA GCCACCTGCA GATACTATTT TTATTCTGTC TGCACGTTCT TCTTCTGCGG TACTTCCCAC TATTGTTTCT CGTTGTCAGG TGGTTGCGTT TAGAACGCTT ACTGACGCTG TAGCTAAAGC CGCTATTATG CGAGAGATTT CTGCTACAGA ACAGGAAGCT CGTATTGCGC TCGCAGCAAC AGGAACCCCT AGTAGAGCTG TGGAGTTTTT GCAGTCGTCT ACGCGCAAGA ATATTCGCAG ACAACTCATT GACGTTTTTG GCAATCTGCT CAGAAATGAC TCGTGGGATG TGCTTATATC CGCAAAAGAG CTGATAGAAG CTGCAAAAAT TCCTCTAGGT GATGTGAAGC GCGCCCAAGA AGAGGCGCTT GCTCAAAGTG AGGATTTTCT TACTAGTGCC GCTTTGAAGC AGGTTGAGGC CGCAAATAAG CGAGAGCTCA CAGCGCGCGA GCGTTCGGGT ATCATAGAAA TGTTGGCAAT TCTGGAATCG CTTCTTCGCG ATGTACTTTT ATGTTGTGAA GCAATCGATG AAGAAATAGT AAATACGGAT GCAGCAGGTA TTATTGACCG TGTTGCGTCT CAAACTCATA CCCAGGGTGT ACTTGGGGCT CTAGCTGCGG TGCAAGAGGC TCAAAACAAC CTGGACCGCT CTGTTTCTCC CCAGCTAACC CTTGAGGTTA TGCTGCTGCA TATCAAGGAG GCACTTACAT GCCCACCGTT GTCCCGGTGA
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Protein sequence | MTQEGTHTAH TAYSLPQALT RLQDQPQVQN LLARALHEHK LGHAYLFVGA PGSGKGLAAK ALAQCVLCAQ GGDAACDDCI RISRGTHPDV HVLTPASANG YLIEQIRQLT ADVSLAPMRS THKIYVIDRA DLLRENSANA LLKTIEEPPA DTIFILSARS SSAVLPTIVS RCQVVAFRTL TDAVAKAAIM REISATEQEA RIALAATGTP SRAVEFLQSS TRKNIRRQLI DVFGNLLRND SWDVLISAKE LIEAAKIPLG DVKRAQEEAL AQSEDFLTSA ALKQVEAANK RELTARERSG IIEMLAILES LLRDVLLCCE AIDEEIVNTD AAGIIDRVAS QTHTQGVLGA LAAVQEAQNN LDRSVSPQLT LEVMLLHIKE ALTCPPLSR
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