| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1062 |
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| Symbol | |
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| ID | 8413935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1205938 |
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| End bp | 1207104 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022651 |
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| Product | sugar isomerase (SIS) |
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| Protein accession | YP_003180081 |
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| Protein GI | 257784864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2222] Predicted phosphosugar isomerases |
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| TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.316402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA AGAGCCAAGA AGAGCTAAAG GCACTAGGTG CGGATATTAC AACTGCCGAG
ATTAAGCAGC AGCCTGAGCT TTGGGAGTCT ACCTTTGGCA TTTATCAAGA GAACCTTTCT
GCAATTAAAG AATTTGTAGA GCGCGCTCGT AGTCTTGGTG GGAAACGTCG TACGCGCGTG
GTTTTTACTG GCGCAGGTAC CTCGGCATAT GTAGGTGATA CCATTACTCC CTATCTTCGT
TCTCATGGCG AGAAGAGCTC TTTTGAGTTT GTGTCTGTTG CAACTACTGA TATTGTTTCT
GATCCTTACG GTAGTCTTGA TCTAGAGGAT CCAACGGTCC TGGTGTCTTT TGCACGCTCT
GGTAATAGTC CAGAGAGTCT TGCTGCAGTA AATATTGCTC GCCAAATTGT TAAAAATCTT
TTGCTCATCA ATATTACTTG CGCTCCTGAA GGAAAACTTG CTGTTGAGTC CGCAGGTAAA
GACGATACAT TGCTTCTTCT TATTCCTGGT GCAAATGACC AGGGCTTTGC AATGACTGGC
TCTTATAGCT GTATGACACT TCTTGCAACG CTTGTCTTTG ATAGCGCCGA TGACCAGCAG
AAGAAGGCTT GGATACTTGA TGCTGCTAAG CTGGGTAGAC AAGTAATTGA ACGTGAGGAA
GAGATTGCTG AGTGGCTCAA GAGTGATTTC AACCGCATTA CTTATTTGGG TTCTGGTCTT
TTTGTGGGTC TTGCTCATGA GGCACAGCTT AAGATTTTGG AACTTGCAGC TGGTATTAAT
GCAACGTCGT GGGATTCTTC AATGGGATAT CGCCACGGAC CAAAGTCTTT TGTTGACGAG
CATACCTTGG TGTTTGATTT TGTTTCTAAC AATCCTTATA CGCGTCAATA TGATCTGGAT
ATTCTTGACG AGATTAGGGG AGACCAGATT GCCGCTCTGA CCATTGGTAT TGAGCAAGAG
GGCACAACAA ACTTTGCGGG AAGAACTTTT AGTCTTCCTG TACTTTCAGA GCCTCTGCCA
GCACCTTATT TGGCTCTGCC CTTTGTAATG GTCGCTCAGG TAGTAGCACT TTTGAACTCA
GTTCGCGTTA ATAACAAACC GGACACACCT TCTCCAACCG GTCAGGTTAA TCGAGTAGTC
AAGGGTGTTA CAATTCACTC ACTGTAG
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| Protein sequence | MFKKSQEELK ALGADITTAE IKQQPELWES TFGIYQENLS AIKEFVERAR SLGGKRRTRV
VFTGAGTSAY VGDTITPYLR SHGEKSSFEF VSVATTDIVS DPYGSLDLED PTVLVSFARS
GNSPESLAAV NIARQIVKNL LLINITCAPE GKLAVESAGK DDTLLLLIPG ANDQGFAMTG
SYSCMTLLAT LVFDSADDQQ KKAWILDAAK LGRQVIEREE EIAEWLKSDF NRITYLGSGL
FVGLAHEAQL KILELAAGIN ATSWDSSMGY RHGPKSFVDE HTLVFDFVSN NPYTRQYDLD
ILDEIRGDQI AALTIGIEQE GTTNFAGRTF SLPVLSEPLP APYLALPFVM VAQVVALLNS
VRVNNKPDTP SPTGQVNRVV KGVTIHSL
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