| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0538 |
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| Symbol | |
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| ID | 8413392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 623685 |
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| End bp | 624614 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022111 |
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| Product | homoserine kinase |
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| Protein accession | YP_003179560 |
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| Protein GI | 257784343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.283285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000181031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCTCGACA ACACCATCTT AACCATTTCT GTACCTGCTA CCTCAGCAAA TATCGGCGTC
GGTTACGATA CGCTAGGTCT TGCATTTAAC CTGCGAGCAA AAATTGCGTT TAGAGAATCT
CCTGCGCTTA TCATTGATGG CTGTCCCGAG CAATTCAGAA ACGAAAACAA CCTTGTATGG
ACGTCATATG TTCGTGCCTG CGAAAAGCTG GGTGAAGAAC CTACACCTAA GCACATCACC
ATCAACTCGC CAATTCCGCT TTCTGGCGGA CTTGGCTCAA GTTCAACCTG TGTTGTTGCG
GGTATTGCGG CTGCAATGAC TGAATCTCAT GGCGGCTGGG ATCCTGAACG TGCGCTTGAT
TTTGCCTGCA ATTTTGAGGG TCATCCCGAT AATGTTGCTC CTGCCATCTA TGGTGGCTTG
ACCTCGTCAT TTGTTGACGG CGGTCATACC GTATGCACCA GAAGACTTGT GGCGCGTGGA
CTTTCTTTTG TCGCGATTGC ACCGCCTTAT ACAGTCAACA CCGAAGACGC TCGTAAAGTA
GTTCCACAAG AAGTCTCTCT TGAAACGGCT GTTTATCAGA TGGGACGCAC CGTTGCCGTT
ACTCATGCCC TTGAAACAGG CAACGGTGGT CTTTTAATGG CCGCTTGTAA TGACAAGCTC
CATGAGCCGT ATCGCAAAGA GCTCATTCCC GATTACGAAG AACTCAAACA AGTGTCTAAG
CTTGCTAGAG CATGCGCATT TGTCATTTCC GGATCGGGTG CCACCATGAT TGCCATCTGC
GACTCCCCTG TTACCGCTCG TGCTGTTGCA GAAAACGCCA AGCAAGTCAG AGGCGATCTC
TGGATTCAGA TTCTTGAGCC GGCGCTTCTG GGTACCGTCC TTACTCTGGA TGACGGCCAA
CAACACCACA GTACTTTCGA CGAAATCTAA
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| Protein sequence | MLDNTILTIS VPATSANIGV GYDTLGLAFN LRAKIAFRES PALIIDGCPE QFRNENNLVW
TSYVRACEKL GEEPTPKHIT INSPIPLSGG LGSSSTCVVA GIAAAMTESH GGWDPERALD
FACNFEGHPD NVAPAIYGGL TSSFVDGGHT VCTRRLVARG LSFVAIAPPY TVNTEDARKV
VPQEVSLETA VYQMGRTVAV THALETGNGG LLMAACNDKL HEPYRKELIP DYEELKQVSK
LARACAFVIS GSGATMIAIC DSPVTARAVA ENAKQVRGDL WIQILEPALL GTVLTLDDGQ
QHHSTFDEI
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