| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0536 |
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| Symbol | |
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| ID | 8413390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 621979 |
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| End bp | 622824 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022109 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179558 |
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| Protein GI | 257784341 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.508685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000200352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCCACTA AAAATCCTAC AAAACTTATT AGACAAGAAT CGCCCAACCT CATTCCTGAG
CGAGACCTTG GCGCAATTCC AGTTCTTCAG GCTGAGCACT TAGGCATTGA CTTTGGCGGC
TTGACTGCTG TTAATGACTT CAATATTGCT CTTGGTCCTA CTGAGATTTC TGGCATCATT
GGTCCTAACG GTGCAGGTAA AACGACTGTC TTTAACTTGC TTACGAGCGT CTACAAGCCA
ACGCGTGGTT CTGTCATGAT TGATGGTTAT GACCTTGCTG GTAAGAGTGT TGTTGAAACA
AACCATATGG GTATTGCTCG AACCTTCCAG AATATTCGTC TGTTCAATAA CATGACTGTT
ATGGAGAACA TCCAGGTTGG TCAGGGAAGT CACATGACAT CTCACTTCTT CGAGGACGTT
TTTCGTCTTC CAGCTCACTG GAAACAGGAG AAGGAGAGCG CTGATAACGC TTGTGAGTTA
CTACGTATTT TTGGCATGGA GAATCTTGCA AATACGCTTG CAGGCAACCT GCCATATGGC
GCTCAGCGCA AGCTTGAGAT TCTTCGTGCT CTGGCAACTC AGCCAAAGAT TCTGCTTCTT
GACGAGCCAG CTGCAGGTAT GAACCCAGCA GAGACTGATG AGCTTATGGA GAACGTCCTT
AAGATTCGTG ACGACTTCAA GATTGCCGTT CTTCTCATTG AGCATGACAT GAAATTTGTT
ATGGGTATCT GTGAGGGACT GGCTGTTCTG GACCACGGCA ATATCATCGC AAAAGGTACC
CCAGAAGAGG TTCAGAACAA TCCTCGTGTT ATTGAGGCCT ATCTTGGAAA GCAGGAGGTG
CGTTAA
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| Protein sequence | MATKNPTKLI RQESPNLIPE RDLGAIPVLQ AEHLGIDFGG LTAVNDFNIA LGPTEISGII
GPNGAGKTTV FNLLTSVYKP TRGSVMIDGY DLAGKSVVET NHMGIARTFQ NIRLFNNMTV
MENIQVGQGS HMTSHFFEDV FRLPAHWKQE KESADNACEL LRIFGMENLA NTLAGNLPYG
AQRKLEILRA LATQPKILLL DEPAAGMNPA ETDELMENVL KIRDDFKIAV LLIEHDMKFV
MGICEGLAVL DHGNIIAKGT PEEVQNNPRV IEAYLGKQEV R
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