| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0046 |
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| Symbol | |
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| ID | 8412888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 50610 |
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| End bp | 51242 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645021613 |
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| Product | hypothetical protein |
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| Protein accession | YP_003179074 |
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| Protein GI | 257783857 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4832] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATTTG ATTTCAAAAA GGAATTTAAA GAGCTGTATG CCCCAAAAAA TAAACCAAGC
ATAGTAAAAG TTCCACGTAT CAACTATCTT GCGGTAAGAG GATTTGGAGA TCCCAACGTA
GAAGATGGTG AATATAAACA GTCAATAGGT CTGCTTTACG GCGTTGCTTA TGCCATCAAA
ATGAGCAAAA AGAGTACACA TCATATTGAA GGATATTTTG ATTTTGTTGT TCCTCCATTA
GAGGGCTTCT GGTGGCAAGA GGATACTCAG GGCGTTGATT ACGCACATAA AGAAAACTTC
AAGTGGATTT CAGTTATTCG CCTACCTGAC TTTGTTACCA AAGAGGATTT TGATTGGTCC
GTTGCTGAAG CAACTAAGAA AAAGAAGCTA GATTTTTCTA AGGTAGAGTT CTTTACCTAT
GATGAAGGTC TCTGTGTACA GTGCATGCAT ATTGGACCCT ATAATAGTGA ACCCGAAACT
GTTTCTCTTA TGCATGAATA TATGGAGAGC CAGGGATACG TTTTAGACAT CACTGCTGAG
CGCATGCATC ATGAAGTTTA TCTGAGCGAT GTACGTAAAA TAGCTCCAGA GAAACTAAAG
ACTGTCATCA GACATCCAAT CAGAGAGGTC TAA
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| Protein sequence | MAFDFKKEFK ELYAPKNKPS IVKVPRINYL AVRGFGDPNV EDGEYKQSIG LLYGVAYAIK
MSKKSTHHIE GYFDFVVPPL EGFWWQEDTQ GVDYAHKENF KWISVIRLPD FVTKEDFDWS
VAEATKKKKL DFSKVEFFTY DEGLCVQCMH IGPYNSEPET VSLMHEYMES QGYVLDITAE
RMHHEVYLSD VRKIAPEKLK TVIRHPIREV
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