| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0032 |
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| Symbol | |
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| ID | 8412874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 39656 |
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| End bp | 40579 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645021601 |
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| Product | sortase, SrtB family |
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| Protein accession | YP_003179062 |
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| Protein GI | 257783845 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4509] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03064] sortase, SrtB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCAA GAAACGGCAA ACATTTTTCA TCATTTGCCG CTGCTGATCA GCCGGCTGAA
GATAATGAAG TTTTAAAAAC CTCTGTTGAA ATGATACCTA TGAAAAGCAT GGTTTCGTCT
AAAAAAGATA GCAATAAGAA AAAACCTGGT AGCAAGCCTG CCAAGAAAGG TTTTTCCAAT
ATCCTTTCAA CCATTTTATT GATAGTTGGA ATTGCTCTCT TAATTGCTGC AGCTATTATG
TTTGGAAAAA CGCAGGTAGA TTATTATGCT CAGGATGTTA TTAATCAGGA GCTTGCAGCT
TATACTACAG TTCCCGAGAA AAAAGACGAG GCTCCTGTTG TTGATTGGGC TGGTCTGAAG
GCAGTGAACA GCCAAGTTGT TGGTTGGATT CAGATTCCTG GATCACAGAT TAACTATCCT
GTTTACCAGA CTACGGATAA TGAGTACTAC CTCCACACCA ACGCAAAGGG AGAGTGGTCT
ATCGGTGGCC AGATTTTTAT GGACTACGAG AATAATCCAA ATGGTTTAAT TGATCAGCAG
ACTATTCTTT ATGGTCACCA TATGCGTAAC GGTTCCATGT TTCAATTCAT TGGTGCCTTG
AACGACCAGA ATACCTTTAA TAAAGTTGAG ACTATCTGGT ATGTTACGCC TACTCAGACG
TATGAGTTAG AGCCTATATT CACTTATCAT ACTGATGAGG ATGACGATGA AGTCAGGCAG
TTTAACTTTA CTTCAGTGGA TGAGTTTAGG TCTTATTTAA AGGATAGGCT TTCTAGAGCA
GTAAGCTCTC GCTCAGATGC GGCTGAGGTT ATTTCTCGCA CCGAGCATGT TCTTACACTC
TTTACCTGTA ATTATACTGA TCAATATGGT CGTACCATGC TCATCTGTGT TCCAAAGAGT
GAGGCTCAGC CAAAGACTCA GTAG
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| Protein sequence | MESRNGKHFS SFAAADQPAE DNEVLKTSVE MIPMKSMVSS KKDSNKKKPG SKPAKKGFSN
ILSTILLIVG IALLIAAAIM FGKTQVDYYA QDVINQELAA YTTVPEKKDE APVVDWAGLK
AVNSQVVGWI QIPGSQINYP VYQTTDNEYY LHTNAKGEWS IGGQIFMDYE NNPNGLIDQQ
TILYGHHMRN GSMFQFIGAL NDQNTFNKVE TIWYVTPTQT YELEPIFTYH TDEDDDEVRQ
FNFTSVDEFR SYLKDRLSRA VSSRSDAAEV ISRTEHVLTL FTCNYTDQYG RTMLICVPKS
EAQPKTQ
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