| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0009 |
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| Symbol | |
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| ID | 8412849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 11891 |
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| End bp | 13030 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021577 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003179040 |
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| Protein GI | 257783823 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.892782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACC TTACTCGTCG TAACTTTTTT GGTGTTAGCG CAGTTGTTGC AGGTTTGGGT
ATTTCTGCCT GTAAAAAGTC AGATTCTAAC ACTGGCGAGA AGAAAGAAAC TGATACCAAC
TCTGCTGATG CCGTCGGTGC ACCAGAAGAA CTGGTAAAGG CAGCAAAAGA AGAGGGTAAG
CTGATTGTTT ATGGTTCTTG TGAGGAAGAG TATCTGAACG CGGTTTGCAC CAATTTCAAG
AGCTTGTATG GCATTGATGT TCAGGTTCAG CGCCTGTCAA CTGGAGAGGT TGCTGCAAAG
ATTGAGGAAG AGAACGGCCA TCCATCAGCA GACGTATGGT TTGGTGGCAC AACTGATCCT
TATAACGTTA CTTCTTCAAA GGGCTTACTT GAACAGTACG AGCCAAAGAA CGCATCGCAC
CTCATTTCCG ATAAGTTTAA GAGCACAAAT AAAGATTGGT ACGGTATTTA CAAGGGAATT
CTTGGCATTC TGTACGATAA AGAAGAGCTC AAGCGCCTTA ATCTTGATGT TCCTCAGGAT
TACAAGGACC TTATCGATCC TAAATACAAG GGTCTTATCT GGTCTTCCAA TTACAACACC
GCAGGTACTG CAAAGCTGAT TATTAATACC GTCATCCAGA AGTATGGACA TGATCAGGGC
ATTCAGTATT TAGTTGATCT TGATAAGAAT ATTGCTCAGT ATACCAAGAG TGGTTCTGGT
CCTTCTAAGG CTATCGGAAC AGGTGAGTGC ACCATTGGAA TTGGTATGCT GCACGACGGC
ATTTATCAGA TTGTTGACCA AGAGCATGAA AACGTTGGCC TTCAGATTCC AAGTTCTGGC
GCATCATACG AGGTTGGTGC AACCGCAATC TTTAAGGGTG CCGCACATCC AAATGCAGCA
AAACTCTGGA TTGAGTATGC ACTTTCGCCA GCATGCGTTG ATCTTGCTCA GAAGAATGGT
TCTTATCAGT TCCTGGTAAT TGACAACGCA AAGCAGCCAG AGATTGCAAC TGAGTACGGT
CTTGATCCAA ACAATGTCAT GGACTACAAC TTCGAGGATG CCAAGAAGCA TACAGAGCAG
TATGTCAAAG ACGTTATGGA AGCTCTTGGT GGCGGAGACA GCCGTTTCAA GACGGAGTAA
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| Protein sequence | MSNLTRRNFF GVSAVVAGLG ISACKKSDSN TGEKKETDTN SADAVGAPEE LVKAAKEEGK
LIVYGSCEEE YLNAVCTNFK SLYGIDVQVQ RLSTGEVAAK IEEENGHPSA DVWFGGTTDP
YNVTSSKGLL EQYEPKNASH LISDKFKSTN KDWYGIYKGI LGILYDKEEL KRLNLDVPQD
YKDLIDPKYK GLIWSSNYNT AGTAKLIINT VIQKYGHDQG IQYLVDLDKN IAQYTKSGSG
PSKAIGTGEC TIGIGMLHDG IYQIVDQEHE NVGLQIPSSG ASYEVGATAI FKGAAHPNAA
KLWIEYALSP ACVDLAQKNG SYQFLVIDNA KQPEIATEYG LDPNNVMDYN FEDAKKHTEQ
YVKDVMEALG GGDSRFKTE
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