| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0060 |
|---|
| Symbol | |
|---|
| ID | 8409557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 60000 |
|---|
| End bp | 60707 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645018398 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003175918 |
|---|
| Protein GI | 257386145 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.235651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.22489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAAT CCGTCCTCGT CGGATCCGAC CTCGTGGTGA CGCGGAGCGG GGAGCAGATC
CTCGACGGCG TCTCGCTCAG CGTCGCCTCG AACGCGACGG TCCTCGTCCA GGGGCCCAGC
GGTGCCGGCA AGACGACGCT GTTCAACGTC CTCGGACTGC TCGAAGCCCC CGAGAGCGGG
ACCCTCCACG TCGACGGTCG CGACGCGAGT GCCCTCTCGG AACGCGAGCG GGCGGCGCTC
CGGCGGTCGA CGATCGGCTT CGTCTTCCAG GACTTCCAGC TGATCGGCGA CCTCACTGCC
CGCGAAAACG CCGCCCTCCC ACAGGAACAC GCCGGGGAAC CCGATCCCGA ATGGCTTGAC
ACGCTGTTCG ATCGGCTGGG CATCGCCGCT CTGGGGGGAC AGTACCCCGC GACCCTCTCG
GGCGGCGAAA AGCAGCGCGT CGCGATCGCC CGCGCACTGG CCAACAGGCC GGAGATCGTC
CTCGCAGACG AGCCCACCGG CCAGCTGGAT CCGGCGACCG CAGACGCCGT CCTGGATCTG
CTCTTCGGTA TGCAGGCGTC GGCCGAGACT GCACTGATCG TGATCAGTCA CGACCCACAG
CTCGCGCCAC ATTTCGACGA GCGGTTGCAA CTCGCCGACG GGCGACTTGT CGAACACGAG
CACAACGACG AACAGCCACC GCAGACCCCG TCCTCGGAGA CCAGCTGA
|
|---|
| Protein sequence | MTESVLVGSD LVVTRSGEQI LDGVSLSVAS NATVLVQGPS GAGKTTLFNV LGLLEAPESG
TLHVDGRDAS ALSERERAAL RRSTIGFVFQ DFQLIGDLTA RENAALPQEH AGEPDPEWLD
TLFDRLGIAA LGGQYPATLS GGEKQRVAIA RALANRPEIV LADEPTGQLD PATADAVLDL
LFGMQASAET ALIVISHDPQ LAPHFDERLQ LADGRLVEHE HNDEQPPQTP SSETS
|
|---|
| |