Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3337 |
Symbol | |
ID | 8409415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013201 |
Strand | + |
Start bp | 147080 |
End bp | 148492 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645018265 |
Product | MATE efflux family protein |
Protein accession | YP_003175786 |
Protein GI | 257373012 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGT GGGGGCGACT CCGTGCTCTC TTCGACGGCC CGACCGACGA CCTAACGACC GGCGGGATAG CCAGGCCGTT GCTCTGGCTT GCCATCCCTA TCGCCGTGAC GAACGCGCTC CAGACGGCGT ACAACCTCGC CGACACGCTC TGGATCGGCC GATACAGCAC CACGTCCCTC GCCGCGATGA GCTTCGCGTT TCCGATGGTG TACCTGCTGT TGTCTCTCGG TCTCGGCGTG TCGGTCGCCG GGAGTGTCCT CGTCGCCCAG CACACGGGCG CTGAAGACAC GGAGGAAGCC AACTTCGTCG CCTCGCAGAC GATCACGTAC GCGGCCGTCG CCTCCGTCGT TCTCGGTGCG ATCGGCTACC TCTTCGTCGA CGACCTGCTG GCGGTACTGG GTGCCTCGGG GGCCGTCCTC ACCGAAGCGA CCGCGTACCT CCGGATCATC TCGCTGGGCA TCGGGTTCCT CTTCACGTTC GTCGTGTTCA TCTCGCTGCT TCGGGGCTAC GGCGACACAG TCACGCCGAT GCTGGTCATG TTCGGCTCCG TCGTCCTCAA CGTTGCCCTG GACCCGATCC TCATATACGG ATGGGGTCCA GTGCCCGAGC TCGGAATTCG GGGTGCTGCG TTTGCGACGG TCGCCTGTCG TGGACTCGCG GCAGCCTTCG GCGTCGCTCT CCTCCTGTAC GGGACCCAGG GGTTACAGAT TCGGCCCGCA AAGATGATCC CCGATATCGA ATTCGGAAAA AAGATCGGTC GTGTCGGGCT GCCGTCTGCC GTCGAAGAGG GTGCGCGTGC GCTCGCTATC AACCTCATGC TGTTCATCGT CGGACTGTTC CCAACGGCCG TTGTCGCGGG CTACGGCGTC GGCATCCGCG TCTTCTCGCT GGTGGTCCTC CCCGCTGTCG CGTTCGCGAG CGGCGTCGAG ACGATGGCCG GGCAGAACAT CGGCGCGAGA GAACACGACC GCGCCGAGCG GACCGTCTCG TTCGCGGCGG TCGCCCTGTT CGGTGTGCTG ACGTTCGTCG GGCTGGTCGT GTGGGTCGGT GCACCTGTCA TCGTGGACGT GTTCACCCGA GACCCGGATG TCGTCGCAGC CGGGGCGACC TTCCTTCGAT TCGTCGCTCC GACGTTCGGA TTCATCGGGG TCCGGCGGGC GTTCAACGCG GGCTTTCGCG GCGCCGGCAA GACAGGCACC GCCGCGATCA TCGTCGTCGG CGTCCTCGGC GTCGTTCGCC TCTCGACAGC CTACGGCGCG GCCGACATCC TCGGACCGAC CGGGATCTGG CTCGGGTTCG CACTGTCGAA CGTCGTCGGC GGCCTCCTTG CGTTCGCCTG GTACTCCCGG GGGACGTGGC GGGGCACCGA CCTGATGGGA GACGCCGGCC CAGAGCCGGC GGACGACGAC TGA
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Protein sequence | MTLWGRLRAL FDGPTDDLTT GGIARPLLWL AIPIAVTNAL QTAYNLADTL WIGRYSTTSL AAMSFAFPMV YLLLSLGLGV SVAGSVLVAQ HTGAEDTEEA NFVASQTITY AAVASVVLGA IGYLFVDDLL AVLGASGAVL TEATAYLRII SLGIGFLFTF VVFISLLRGY GDTVTPMLVM FGSVVLNVAL DPILIYGWGP VPELGIRGAA FATVACRGLA AAFGVALLLY GTQGLQIRPA KMIPDIEFGK KIGRVGLPSA VEEGARALAI NLMLFIVGLF PTAVVAGYGV GIRVFSLVVL PAVAFASGVE TMAGQNIGAR EHDRAERTVS FAAVALFGVL TFVGLVVWVG APVIVDVFTR DPDVVAAGAT FLRFVAPTFG FIGVRRAFNA GFRGAGKTGT AAIIVVGVLG VVRLSTAYGA ADILGPTGIW LGFALSNVVG GLLAFAWYSR GTWRGTDLMG DAGPEPADDD
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