Gene Jden_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2526 
Symbol 
ID8381679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2709550 
End bp2711844 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content56% 
IMG OID645005291 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003162461 
Protein GI256833734 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGAT CAAGAACCCG CGTTTCGGCA TCTGGAAAGG TGAAGAGGAA ACGCATCATT 
GACTATCCCC GGTACGGGAA GAGCGGCATT AGGAGGTGGA TACCTTCGTG GCGCTTCTTT
CTTGGTACCT TTCTCACTGG GGCGGCTCTT GTTGCCGGTT TGTTGATCGC AGCTTATGCG
AGTGTGGAAA TCCCTGAACC GACTGACTTT GCCCAATCGC AAACGTCAAC GGTGTATTAC
TCCGATGGTG AGACGGTTCT TGGTGAGTTC GCTGAGGTGG ACCGCAAGAT CATTAACACC
CGGGAGCTCC CTGACCATGT GAAGTACGCC GTTGTTGCCG CGGAGGACCG CACGTTCTAT
CAGAACAACG GGGTGGACTT TAAGGGTATT GCTCGTGCGT TCTATTTGAA CGTGCGCTAT
GACACCAATA TGGGTGCGTC CACGATTACC CAGCAGTATG CGGAGCGATA TTTCCATGAG
GACACGATTG GCCGTTCGGG AAACAGGTTT AAGGACTATG CGGCCAAGCT CGAAGAAGCA
ATCCTCGCCC TCAAACTGAG CCAGAACCAG GACAAAGAAG ACATCCTCGA CGGTTACATG
AACACGATCT ATTTTGGTCG TGGGGCGTAC GGCATTGAGG TTGCTGCTGA GAAGTACTTT
GACAAACCAG CAGCGGAGTT GACTTTGTCC GAGGCGGCCA TGATCGCTGG GGTGATCCCA
TCACCGAGTA ACTGGGATCC GGCAAAATCT CCAGAAAAAT CGTTGGAGCG ATGGAACTAC
GTCTTGGACG GTATGGCTGA CCTTGGTTTC ATCACGCAGG CCGAGCGTGC TGAGCAAGAA
TTTCCTGAGT GGGTGGAGTA CAACCCAGAG AACCGGTTTG GTGGACCCAA GGGTTACCTA
CTCGCTTTGG CGAAGGCTGA GGTGCTTGAC AAAACAGGGA TGACGGAAGA CGACCTCAAC
TCTCAAGGTG TCCGCATCGT CACGACCTTT GACCGTAACT TACAGCGCAA ACTGGAAAAA
GCGATCTCTG ATATGCCGGA GGGCGGCAGC GAACGTCTCA TGGTTGCCGG CGTGACGGTG
GACCCCAAAA CTGGTGCCGT GCGCTCGCTG TACGGAGGCG CTGACTATTT GACGAACCAG
TACAACGCTG CGACTCAGGG GCAGGCGCAG GCTGGTTCAA CCTTTAAACC GTTTACCTTG
GTGGGCGCTA TTGAAGAGGG CATCCCGGTC GATAACCAGT ACTTTGATGG AAACTCACCG
CGCACTTTTG ATGACAATGG GAAGCCATAT CCAGTCAACA ACTTCGGGCT GTACTCCTAT
GGTCAAATCA ATTTGGCTAA GGCGACTGCG AACTCGGTGA ACACCGTGTA TGTAGACGTG
AACCAGCAGA TTGGGCCAGA AAAGACCGTG GATGTTGCGA TCCGCGCTGG TATCCCCTCA
GACACGGTGG ACTTGGATCC GGTGTTGTCG AACGTGCTGG GCACGGCAAC CGTGAAACCC
ATTGATATGG CAAGTGCGTA TGCAACGTTT GCGGCCTCCG GGCAGCATAA TGACACGTAT
TTTGTGGAGA GTGTGGAGCG GCGCGGATCG CTCGTCTATG AGCACTCTGC GATTGCCAAG
CAAGCGTGGC GTGCCGATGT GGGCGCTGAG GCGACCTATG CGCTGACTCG GGTTGTTGAG
GAAGGTTCAG GGCAGAAGGC GCGCGCTATC GGGCACCCCA TTGCCGGGAA GACCGGAACA
TCGAATAAGA ACCGATCCGC GTGGTTTGTG GGGTACACCC CCAGCTATGC CACGGCTATC
GCGCTCTACC AGCAAACCGA AGATGGTGGA CAAGACGAGA TCACCCCGTT TGGCGGGTAC
AGCGAGATCA CGGGTGGGTC AGTTCCGGTG GATATTTGGA CTGACTACAT GGGCCGGGTC
CTCAAGGACC AACCGGTAGA GCAGTTCCCG GACCGCACGA TTGTTCAGCC TGCGCCAACG
CCGACATACA CCGAAGAACC TGAACCGGAA GAGACTGAAG AAACTGAGGA ACCTACAGAG
GAACCGGTTG AGCCGACTCA GGAACCGACC CAGGAACCGA CTCAGGAACC CACACAAGAG
CCGACCCAAG AGCCGACTCA GGAACCAACC CAGGAACCGA CTCAGGAACC AACCCAGCCC
ACGCCTGATC CAGGTGGGGG AGACACCGGT GGTGGAAACA CCGGCGGCAA TACTGGTGGT
GGCTCAGGTG GGGGAAACAC CGGCGGCGGC AATACGGGTG GTGGGACCGG CACCAACACG
GGCAATACTG GGTGA
 
Protein sequence
MAGSRTRVSA SGKVKRKRII DYPRYGKSGI RRWIPSWRFF LGTFLTGAAL VAGLLIAAYA 
SVEIPEPTDF AQSQTSTVYY SDGETVLGEF AEVDRKIINT RELPDHVKYA VVAAEDRTFY
QNNGVDFKGI ARAFYLNVRY DTNMGASTIT QQYAERYFHE DTIGRSGNRF KDYAAKLEEA
ILALKLSQNQ DKEDILDGYM NTIYFGRGAY GIEVAAEKYF DKPAAELTLS EAAMIAGVIP
SPSNWDPAKS PEKSLERWNY VLDGMADLGF ITQAERAEQE FPEWVEYNPE NRFGGPKGYL
LALAKAEVLD KTGMTEDDLN SQGVRIVTTF DRNLQRKLEK AISDMPEGGS ERLMVAGVTV
DPKTGAVRSL YGGADYLTNQ YNAATQGQAQ AGSTFKPFTL VGAIEEGIPV DNQYFDGNSP
RTFDDNGKPY PVNNFGLYSY GQINLAKATA NSVNTVYVDV NQQIGPEKTV DVAIRAGIPS
DTVDLDPVLS NVLGTATVKP IDMASAYATF AASGQHNDTY FVESVERRGS LVYEHSAIAK
QAWRADVGAE ATYALTRVVE EGSGQKARAI GHPIAGKTGT SNKNRSAWFV GYTPSYATAI
ALYQQTEDGG QDEITPFGGY SEITGGSVPV DIWTDYMGRV LKDQPVEQFP DRTIVQPAPT
PTYTEEPEPE ETEETEEPTE EPVEPTQEPT QEPTQEPTQE PTQEPTQEPT QEPTQEPTQP
TPDPGGGDTG GGNTGGNTGG GSGGGNTGGG NTGGGTGTNT GNTG