| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2271 |
|---|
| Symbol | |
|---|
| ID | 8381427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2460491 |
|---|
| End bp | 2460916 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645005034 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003162209 |
|---|
| Protein GI | 256833482 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.571583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGAA AAAAGATCGC CGACATGACT CAGGCGGAGC GTGTCGAGGC GGCTGCGACC
ATCGCGGACA TTCGTGAGCG CCTAGGAATC AGCCAGCAAG AACTGTCAGA TGCGACCGGG
ATCAGTCGGC AAACCATCTC AAACATCGAG CGTGGCGCAA CAAGGCCGAA CAGCAAGTCT
CTTGAGAAGA TTTTCGAGGC TCTAGGCGTC TCAGACGCCC CAGAGTTTGA CGCGGCAACT
GAAAAGTGGC TTGTCATGGT CGGCACTCTC GTGGAACGAA TCCCCGCGCA ACGACGGCAG
AAAGCCATGG ACTCTACGAT GCACTACCTG GCGCTGTCAG TGGGAGCGGA TATAAAAGAC
TTCGTCCTGG CAGCAAGCGA GGCTGACCAT GATAAAGAGT CCGAAGCTCA AGAAACCCAA
CCCTGA
|
|---|
| Protein sequence | MSRKKIADMT QAERVEAAAT IADIRERLGI SQQELSDATG ISRQTISNIE RGATRPNSKS
LEKIFEALGV SDAPEFDAAT EKWLVMVGTL VERIPAQRRQ KAMDSTMHYL ALSVGADIKD
FVLAASEADH DKESEAQETQ P
|
|---|
| |