Gene Jden_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2084 
Symbol 
ID8381243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2275784 
End bp2276965 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content57% 
IMG OID645004837 
Producthistidine kinase 
Protein accessionYP_003162025 
Protein GI256833298 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.115091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGGTT TCGCGTTGAT AGTCGCCGGT GCGGTCGGTT TGATGACCGG GGTCTTTGCA 
ACACTCGCAT TTCAATACAG TGAACGCCAA CAACGGCGTT TACCCCAGCG CCGTCATCGG
GATCTTGATG ACGGCGTGAT TCGGGTGTTA GCGATTTTAC GGTCAGCCGC CATTGTGGTG
CGCCATGATG ACGCAGTGGT GCGTGCATCG GCGCCTGCCT ATGCGTTGGG GATCGTCCGG
GGTGAGCGGA TCGCTCATGC TGCAATTCAG GACATGATCG ATGAGGCTCG GAAAACTGGC
CTCATTTTGG ATGAGGAATT GGAACTGCCG CGCGGCCCGG TTGGGCGCGG ACGTGTGATG
CTTCAAGTGC GGGTGGCTCA TCTTGACGGC GAACATATTG TCATCCTTGC TGAAGACCGC
ACAGAAGCTC GTCGAGTGGA AATGATTCGC CGCGACTTCA CCGTCAACGT CTCTCATGAA
CTAAAAACTC CGGTGGGGGC CATTGGTCTG TTAGCGGAAA CCCTTCAAGA TGCTGCTGAT
GACCCGGACG CCGTGCGCCA TTTTGCGGGG CGTATGCAGC AAGAGTCTGA GCGCCTGGGG
GCGCTCGTCC AAGAAATTAT TGAACTGTCC CGTTTGCAGT TGCAGTCCTC TGCGCAACCG
CTTCGGGTTA TTCCTATCGA TGCGGTGCTG ACAGAAGCCA CAGACCGGGC GAAGGTTGTT
GCCTCAGGGC GACACATTGA GATCAATGTT GCCACGAACA CCGGTGTGTA CGTGTATGGG
GATCACAACC TTCTTGTCAC CGCGGTCCGT AACTTGGTGG ATAACGCGGT CGCTTACTCG
CCTGAGCACA CCACTGTGGG TGTGGGGGTG AAGCGCCGGG AAGACTTGGT GGAAATATCC
GTTGTGGATC AAGGCATCGG GATTTCTCCG GATCACCAGC AGCGCATTTT TGAACGTTTT
TATCGAGTGG ACCCCGCCCG TTCACGAGCC ACTGGCGGGA CCGGACTGGG GTTGTCGATC
GTCAAGCATG TTGCCGCAGA TCATGGTGGC GACGTGTCCT TGTGGTCACG ACCCGGACAA
GGCTCAACTT TTACTCTCCG TATCCCTGCC GTGGCTGAAG GGACAATCCC AGTCAAGCCA
GCAGACCCGC CGACCATTGA CCTGAAGGAG ACTCCACAGT GA
 
Protein sequence
MEGFALIVAG AVGLMTGVFA TLAFQYSERQ QRRLPQRRHR DLDDGVIRVL AILRSAAIVV 
RHDDAVVRAS APAYALGIVR GERIAHAAIQ DMIDEARKTG LILDEELELP RGPVGRGRVM
LQVRVAHLDG EHIVILAEDR TEARRVEMIR RDFTVNVSHE LKTPVGAIGL LAETLQDAAD
DPDAVRHFAG RMQQESERLG ALVQEIIELS RLQLQSSAQP LRVIPIDAVL TEATDRAKVV
ASGRHIEINV ATNTGVYVYG DHNLLVTAVR NLVDNAVAYS PEHTTVGVGV KRREDLVEIS
VVDQGIGISP DHQQRIFERF YRVDPARSRA TGGTGLGLSI VKHVAADHGG DVSLWSRPGQ
GSTFTLRIPA VAEGTIPVKP ADPPTIDLKE TPQ