Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1378 |
Symbol | thrS |
ID | 8380555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1474023 |
End bp | 1476044 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645004127 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_003161337 |
Protein GI | 256832610 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0410171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0241813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGAATC CATCGCCCAC GTCGCCCAGC TTCACAATCA CTCTTGACGG TGAAACGACC CAGGTGACCG ACGGCACGAC CGGCACCGAC CTGTTTTCGG CGAACAAAAA CATTGTGGTG CTCAGGGTCA ATGGTGAACT CAAAGACTTG TTCTACCGTG TTGCCGCTGG TGATGTTGTT GACGGCGTCG ACATCAATGA ACCTGATGGT CTGAACGTGT TGCGGCACTC GGCAGCTCAC GTGCTCGCGC AGGCTGTTCA AAAGGTAAAC CCGGATGCCA AGTTGGGGAT TGGCCCGCCC ATCGTGGACG GTTTCTACTA TGACTTTGAT GTGGAGACCC CGTTCGCTCC TGAGGACTTG AAAAAACTCG AAAAAGAAAT GATGCGCATC GTCAAGGAAG GGCAAACCTT CCAGCGCCGA GTCATCACTG AGGAGCAAGG GCACACAGAA CTTGCGGGGG AGCCCTACAA AATTGAACTG ATTTCGCTGA AATCACAGTC GGACACCGCA GCGGAAGGCG CCTCAGTTGA GGTGGGAGCC GGTGAGCTAA CAATCTACGA CAATGTACGC CGCAATGGCG AGGTTGCCTG GGGGGATCTG TGTCGCGGCC CGCACCTGCC GAGCACGAAG CTCATTGGAA ACGGTTTTAA GCTTATGCGC AGTGCTGCGG CATACTGGCG TGGCAGCGAG AAAAACCCGC AACTGCAGCG TATTTATGGC ACCGCATGGC CAACTAAGGA CCAGCTCACT GAGCATCTGA CTCGTCTAGC TGAGGCCGAA CGCCGCGACC ACCGCCGTCT TGGGGTAGAG ATGGATTTGT TCTCATTCCC CGATGAGATG GGGTCAGGGC TTGCGGTGTT CCACCCGCGC GGCGGGGTGG TGCGCTTGGA AATGGAAGAA TACTCGCGCC GCCGCCACAT CGAGGCAGGG TACTCGTTTG TCAACAGCCC GCACATCACC AAAGGGCGGC TGTATGAGGT CTCTGGTCAC TTGGATTGGT ACCGCGAAGG CATGTACCCC GCCATGCACA TGGATGAGGA ACGTGACGCT GACGGGACCT TGCGTAAGCA GGGGCAAGAC TATTACCTCA AACCCATGAA CTGTCCGATG CATAACCTGA TTTTCGATGC GCGAGGCCGT TCGTACCGTG AACTTCCGTT GCGGTTGTTT GAATTTGGAA CGGTATACCG TTACGAAAAA TCTGGGGTGA TTCACGGGTT GACGCGGGCG CGCGGGTTCA CACAAGATGA TGCGCACATC TACTGCACGA AAGAGCAGAT GAAAGACGAA CTGACGAATG CTCTGACTTT TGTGCTTGAC CTGCTCAAAG ATTATGGTCT TGATGATTTC TACCTTGAGT TGTCTACCCG GGACCCAGAA AAATCAGTGG GAACTGATGA GATATGGGAC GAAGCGACCC GCACGTTAGA GGAAGTTGCC CAAGACTCCG GTTTAGAGCT TGTCCCTGAT CCTGGTGGGG CCGCGTTCTA CGGGCCAAAG ATTTCCGTGC AAGCGAAAGA TGCCATTGGG CGCACTTGGC AGATGTCCAC AATCCAATTG GACTTTAACT TGCCTGAGAA GTTCGACTTG GAATACCAAG CTGCAGACGG CACACGGCAA CGGCCTGTGA TGATCCACCG AGCTTTGTTT GGTTCCATTG AGCGTTTCTT CGCCGTGTTG CTGGAACACT ATGCCGGTCA GTTCCCCGTA TGGCTTGCCC CGGTGCAGGT GCTCGCCGTA CCGGTTGCTG ACGCTTTCAA CGACTACCTG GGTGACTTCG TAGCTGAACT ACGCACTCGC GGTGTCCGTG CGGAACTGGA CGATTCCAGT GACCGGTTCC CCAAGAAGGT CCGCAACGCT TCCACCTCGA AAGTGCCCTT CACCGTTATT GCTGGTGGTG AAGATGAACA AGCTGGTGCT GTGTCGTTCC GGTACCGCGA TGGTAGCCAA GAAAATGGGA TCCCACGGGA ACAAGCAATT ACCCGTATCC TTGAGTCCAT TTCGACCCGA GCACAGGTTT AA
|
Protein sequence | MSNPSPTSPS FTITLDGETT QVTDGTTGTD LFSANKNIVV LRVNGELKDL FYRVAAGDVV DGVDINEPDG LNVLRHSAAH VLAQAVQKVN PDAKLGIGPP IVDGFYYDFD VETPFAPEDL KKLEKEMMRI VKEGQTFQRR VITEEQGHTE LAGEPYKIEL ISLKSQSDTA AEGASVEVGA GELTIYDNVR RNGEVAWGDL CRGPHLPSTK LIGNGFKLMR SAAAYWRGSE KNPQLQRIYG TAWPTKDQLT EHLTRLAEAE RRDHRRLGVE MDLFSFPDEM GSGLAVFHPR GGVVRLEMEE YSRRRHIEAG YSFVNSPHIT KGRLYEVSGH LDWYREGMYP AMHMDEERDA DGTLRKQGQD YYLKPMNCPM HNLIFDARGR SYRELPLRLF EFGTVYRYEK SGVIHGLTRA RGFTQDDAHI YCTKEQMKDE LTNALTFVLD LLKDYGLDDF YLELSTRDPE KSVGTDEIWD EATRTLEEVA QDSGLELVPD PGGAAFYGPK ISVQAKDAIG RTWQMSTIQL DFNLPEKFDL EYQAADGTRQ RPVMIHRALF GSIERFFAVL LEHYAGQFPV WLAPVQVLAV PVADAFNDYL GDFVAELRTR GVRAELDDSS DRFPKKVRNA STSKVPFTVI AGGEDEQAGA VSFRYRDGSQ ENGIPREQAI TRILESISTR AQV
|
| |