| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1258 |
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| Symbol | |
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| ID | 8380435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1349299 |
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| End bp | 1350081 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004006 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_003161217 |
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| Protein GI | 256832490 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.352341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCAACG CACGTACCCC GCTCATTGCT GGTAACTGGA AAATGAACCT CGACCACAAC
GAGGCGATTC ACACAGTCCA AAAGCTCGCA TGGGCGTTGA AAGATGCACA ACACGACTAC
AACGCTGTTG AGGCGACAGT TTTGGTGCCC TTCACCGACA TTCGTTCCGT CCAGACACTT
GTTGACTCCG ACAAACTGGG CATCACCTAC GGTGCGCAGG ACCTCTCCGC ACAGGTTTCT
GGTGCGTATA CCGGTGAAAT TTCACCAGTG TTCCTCTCAC GTCTTGGCGT GAAGTATGTG
GCTGTGGGGC ACTCTGAGCG CCGCCAGTAC CACGGTGAAG ACGACGCCCT TGTGAACGCA
AAGACCAAAA ACGCACTTGC GCACGACATT GCACCAATCG TGTGTGTGGG GGAGCCTCTT
GAGGTTCGCA AAGCCGGTGA CCAAGTGCCG TTCACACTTG CACAGGTCGA TGGTGCATTT
GCTGACATCT CAGCTGAGGA CGCCGTCAAG GTTGTTGTTG CCTACGAACC TGTGTGGGCA
ATCGGAACTG GCGAGGTTGC AACACCAGCA GATGCACAAG AAGTCGCCCA GGCTATTCGT
GCTCGGCTGG CGGAACTGTA CTCACAAGAC GTCGCTGACG CTGTCCGCGT CCTGTACGGC
GGTTCTGTGA AGTCATCGTC AATCAAGGAA CTCATGAACG AAGCTGACGT CGATGGGGCC
CTTGTTGGTG GCGCTTCGCT TGACCCAGAA GAGTTCGCCA AGATTGTCCA CTACCAGGAC
TGA
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| Protein sequence | MTNARTPLIA GNWKMNLDHN EAIHTVQKLA WALKDAQHDY NAVEATVLVP FTDIRSVQTL
VDSDKLGITY GAQDLSAQVS GAYTGEISPV FLSRLGVKYV AVGHSERRQY HGEDDALVNA
KTKNALAHDI APIVCVGEPL EVRKAGDQVP FTLAQVDGAF ADISAEDAVK VVVAYEPVWA
IGTGEVATPA DAQEVAQAIR ARLAELYSQD VADAVRVLYG GSVKSSSIKE LMNEADVDGA
LVGGASLDPE EFAKIVHYQD
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