Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1196 |
Symbol | |
ID | 8380373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1274176 |
End bp | 1275066 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003943 |
Product | protein of unknown function DUF75 |
Protein accession | YP_003161155 |
Protein GI | 256832428 |
COG category | [R] General function prediction only |
COG ID | [COG1938] Archaeal enzymes of ATP-grasp superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00179103 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0638399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCG ATGAAGGTCA CCTGGATGCG TCACGTGGTG ACGAGGAGGA CGCAGTGTGG GCGCTGAGCC ATGACACGGT GCTCATTGCC GCGTTTTCTG GGTGGAATGA TGCCGGAGGC GCTGCAACCG GTGCCACTGA ACACATTGCC GAGGTGTTTG GGTGTGATGT TGTTGCTGAC ATTGACCCTG ATGAGTTTGT CGATTTTCAA GTCAACCGGC CGGTGGTAGA TGGTGTTGGT GTCGACCGGC GGCTGGTGTG GCCTGGGACC CAAATTTCCA TGGCTTATTC GTGGAATAGT CAGCGGCGTA TTGTTGTCGC TCACGGTGTC GAGCCGTCAT TTCGGTGGCG TTCGTTTACC GCAGAGTTGT TGACGGTGGC AGAATCTTTC GGTGTTAAAA CCATTATTGT GGTCGGTGCA CTGTTGGGGG ACACGCCTCA TTCCCGTCCG ATTCCGGTGC AGGTCAGTAC TAGTGATGCT GGGGTGCAAG AATTTTTGGG AACCGGGGAT TCAGAGTATG AAGGGCCAAC GGGGATTGTG GGAGTCATCT CGCAGATCGC TCCCGATGCG GGGTTTACCG TGCTCAGTGT GTGGGGGGCG GTCCCACACT ATGTGCCGTC CTCTCCCTCA CCCAAAGCAA CGGCTGCGTT GGTGTCAAAG ATTGAAGAAC TCCTTGGTGA ACCCATCACC CGCTACGACC TCGATGATGA GGCCAAAGCG TGGGAAGACG GCGTTAGTGA GCTTGCTGAA TCTGACCCAC AGATCGCTCA GTATGTGCGT GAGTTGGAAG AAGTGCGAGA TGCTACGCAA TTACCCAACG CCTCTGGGGA GGCAATCGCA CGAGAATTTG AGCAGTATTT GCGGCGGCGA GGGCAGTCCC CCGCAGATTA A
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Protein sequence | MERDEGHLDA SRGDEEDAVW ALSHDTVLIA AFSGWNDAGG AATGATEHIA EVFGCDVVAD IDPDEFVDFQ VNRPVVDGVG VDRRLVWPGT QISMAYSWNS QRRIVVAHGV EPSFRWRSFT AELLTVAESF GVKTIIVVGA LLGDTPHSRP IPVQVSTSDA GVQEFLGTGD SEYEGPTGIV GVISQIAPDA GFTVLSVWGA VPHYVPSSPS PKATAALVSK IEELLGEPIT RYDLDDEAKA WEDGVSELAE SDPQIAQYVR ELEEVRDATQ LPNASGEAIA REFEQYLRRR GQSPAD
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