Gene Jden_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0575 
Symbol 
ID8379760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp622849 
End bp623670 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID645003312 
ProductNusG antitermination factor 
Protein accessionYP_003160542 
Protein GI256831815 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.603721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00747859 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTCAGG AGTCGTACGA AACGACAGAG GAGAACACTG ACGCTCCCAT CGTCGCAGAT 
GGCAGCGACC TCACCGTATC CGAGGACTCC CTTGTAGACG ACGCGGCCAC CTCGGTCAAC
GACAGTGACC CCACTGACAA TGAACCCACC GATATCGCTA AACCTGATGC GGAAACCGGT
GACGGTGACA GTGATGATGC GGATGACAGC GAGACCCCGA CCGAAGAAGA CCCCCTCGAG
GTCTTTCGTC GTGAGCTCGA CGCACTTCCC GGGCAGTGGT ACGTGATCCA CTCCTACGCT
GGATACGAAA ACCGGGTGAA GTCTAACCTC GGTACTCGTA TCCAAAGCCT CAACATGGAG
GACTACATCT TCCAAATTGA GGTTCCCATG GAGGAAGTTG CGGAAATCAA AAACGCACAA
AAGAAAATTG TTCGCCGCGT GCGCATCCCC GGTTACGTTC TCGTCCGCAT GGACCTCACC
GATGAATCGT GGGGAACGGT GCGTCACACA CCTGGTGTCA CCGGATTCGT CGGAAACACC
CACCAGCCCG TTCCCCTCAC TCGCGACGAA GTGTTCTCCA TGCTTGCACC CACGCTGCAA
CAAGGGGAGT CGCCAAAGAA GAAGAGCAAG GCAAAACCAG CCGCTGTCAC CGTCGACTTC
ACTGTTGGTG AATCTGTCAC CGTGACCGAT GGGCCTTTCG AAACCTTGCC TGCAACGATT
TCCGAAATCA ACATTGAAGC CCAAAAGCTC AAGGTGTTGG TTTCGATTTT CGGCCGGGAG
ACACCGGTCG AACTGGGCTT CAACCAGGTC GCCAAGATCT GA
 
Protein sequence
MSQESYETTE ENTDAPIVAD GSDLTVSEDS LVDDAATSVN DSDPTDNEPT DIAKPDAETG 
DGDSDDADDS ETPTEEDPLE VFRRELDALP GQWYVIHSYA GYENRVKSNL GTRIQSLNME
DYIFQIEVPM EEVAEIKNAQ KKIVRRVRIP GYVLVRMDLT DESWGTVRHT PGVTGFVGNT
HQPVPLTRDE VFSMLAPTLQ QGESPKKKSK AKPAAVTVDF TVGESVTVTD GPFETLPATI
SEINIEAQKL KVLVSIFGRE TPVELGFNQV AKI