Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0575 |
Symbol | |
ID | 8379760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 622849 |
End bp | 623670 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003312 |
Product | NusG antitermination factor |
Protein accession | YP_003160542 |
Protein GI | 256831815 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.603721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00747859 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCTCAGG AGTCGTACGA AACGACAGAG GAGAACACTG ACGCTCCCAT CGTCGCAGAT GGCAGCGACC TCACCGTATC CGAGGACTCC CTTGTAGACG ACGCGGCCAC CTCGGTCAAC GACAGTGACC CCACTGACAA TGAACCCACC GATATCGCTA AACCTGATGC GGAAACCGGT GACGGTGACA GTGATGATGC GGATGACAGC GAGACCCCGA CCGAAGAAGA CCCCCTCGAG GTCTTTCGTC GTGAGCTCGA CGCACTTCCC GGGCAGTGGT ACGTGATCCA CTCCTACGCT GGATACGAAA ACCGGGTGAA GTCTAACCTC GGTACTCGTA TCCAAAGCCT CAACATGGAG GACTACATCT TCCAAATTGA GGTTCCCATG GAGGAAGTTG CGGAAATCAA AAACGCACAA AAGAAAATTG TTCGCCGCGT GCGCATCCCC GGTTACGTTC TCGTCCGCAT GGACCTCACC GATGAATCGT GGGGAACGGT GCGTCACACA CCTGGTGTCA CCGGATTCGT CGGAAACACC CACCAGCCCG TTCCCCTCAC TCGCGACGAA GTGTTCTCCA TGCTTGCACC CACGCTGCAA CAAGGGGAGT CGCCAAAGAA GAAGAGCAAG GCAAAACCAG CCGCTGTCAC CGTCGACTTC ACTGTTGGTG AATCTGTCAC CGTGACCGAT GGGCCTTTCG AAACCTTGCC TGCAACGATT TCCGAAATCA ACATTGAAGC CCAAAAGCTC AAGGTGTTGG TTTCGATTTT CGGCCGGGAG ACACCGGTCG AACTGGGCTT CAACCAGGTC GCCAAGATCT GA
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Protein sequence | MSQESYETTE ENTDAPIVAD GSDLTVSEDS LVDDAATSVN DSDPTDNEPT DIAKPDAETG DGDSDDADDS ETPTEEDPLE VFRRELDALP GQWYVIHSYA GYENRVKSNL GTRIQSLNME DYIFQIEVPM EEVAEIKNAQ KKIVRRVRIP GYVLVRMDLT DESWGTVRHT PGVTGFVGNT HQPVPLTRDE VFSMLAPTLQ QGESPKKKSK AKPAAVTVDF TVGESVTVTD GPFETLPATI SEINIEAQKL KVLVSIFGRE TPVELGFNQV AKI
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