| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0267 |
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| Symbol | |
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| ID | 8379462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 285051 |
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| End bp | 286439 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003001 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003160244 |
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| Protein GI | 256831517 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.39283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.349323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGA TCCGGCGGCG CTCGCTGGTC ACCTTGGCGA CAGGGATGAC CCTGGCGCTC
ACACTCGCAG CCTGTGGCGG AGGCGGCGAC AATGACAACA ACGCGGCAGC ACCAGGGGGA
GACGGCGACA CAGACTGTGC AGCCTTCGAA AAGTACGGTG ACCTCTCCGG CACCACAGTG
TCGGTCTACA CCTCAATCAT CGCCCCCGAA GACCAACCCC ACATTGATTC CTACAAGCCA
TTCGAGGAAT GCACCGGGGC GACTATCAAC TACGAAGGCT CCAAAGAATT TGAAGCCCAG
TTGCTCGTGA AACTTCAATC AGGTGCAGCC CCAGACATTG CCTACATCCC TCAGCCTGGT
TTGCTGAAAA CCATTGTTGA GTCCTACCCG GACAGTATCG TTCCAGCCTC CGAGGGAACC
CAGGCGAACG TCGACGAATA CTTCGCGGCG TCTTGGAAAG AGTACGGATC AGTTGACGGA
ACGTTCTACG CAGCACCACT TGGTGCCAAT GTGAAGTCAT TCGTGTGGTA CTCACCAAAG
ATGTTCGCCG ACTCCGGCTA CGAAATCCCC ACCACCTGGG ATGACCTGCT TGCCCTTTCC
GACCAGATCG TAGCCGACCA CGGTGCCGAA GGTGTGAAGC CATGGTGTGC TGGAATCGGT
TCAGGTGACG CAACTGGATG GCCAGCAACC GACTGGCTCG AAGACATCAT GCTTCGTACC
GCCGGGTTCG AGACCTACGA CGCCTGGAGC AAGGGTGAAG TGAAGTTCTC CGACCCAGAG
GTCAAAACGG CACTGGCTGA AGTAGGCAAG ATCCTCAAGA ACCCTGACTA CGTCAACGGT
GGCTTGGGTG ACGTCAGCTC GATCGCCACC ACAGAGTTCC AAGACGGTGG TCTCCCCATC
CTCGAGACTG GACTGTGCTA CATGCACCGG CAAGCATCGT TCTACGCTGC GAACTGGCCA
GAAGGCACCG ACGTTTCTGC AGATGGCGAC GTGTTCGCGT TCTACTTCCC TGGCACAAGC
GAAGACTCAC GCCCCATCCT TGGTGGTGGA GAATTCGTTG CAGCCTTTGA CGACCGACCA
GAGGTCGCCG CATTCCAGGA ATTCCTTGCC AGCCCAGAGT GGGCAAACGC CAAAGCGATC
GCCACACCAA GCGGTGGCTG GGTTTCCGCG AACTCAGGAC TTGACCCCAA CAACCTCGTC
TCTGAGATCG ACAAGCTGTC CTTCGAACTG CTCTCCGACA CGAGCCAGGA GTTCGGGTTC
GACGCATCCG ACCTCATGCC CGCAGCAGTT GGTCAAGGTG CGTTCTGGAC AGAAATGACC
GCCTGGATCG CTGAGGACAA GTCCGACGAC GCCGTTCTCA CCGCGATTGA CTCGGCGTGG
CCAAACTGA
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| Protein sequence | MTTIRRRSLV TLATGMTLAL TLAACGGGGD NDNNAAAPGG DGDTDCAAFE KYGDLSGTTV
SVYTSIIAPE DQPHIDSYKP FEECTGATIN YEGSKEFEAQ LLVKLQSGAA PDIAYIPQPG
LLKTIVESYP DSIVPASEGT QANVDEYFAA SWKEYGSVDG TFYAAPLGAN VKSFVWYSPK
MFADSGYEIP TTWDDLLALS DQIVADHGAE GVKPWCAGIG SGDATGWPAT DWLEDIMLRT
AGFETYDAWS KGEVKFSDPE VKTALAEVGK ILKNPDYVNG GLGDVSSIAT TEFQDGGLPI
LETGLCYMHR QASFYAANWP EGTDVSADGD VFAFYFPGTS EDSRPILGGG EFVAAFDDRP
EVAAFQEFLA SPEWANAKAI ATPSGGWVSA NSGLDPNNLV SEIDKLSFEL LSDTSQEFGF
DASDLMPAAV GQGAFWTEMT AWIAEDKSDD AVLTAIDSAW PN
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