| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0003 |
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| Symbol | |
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| ID | 8379203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 3384 |
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| End bp | 4631 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645002738 |
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| Product | DNA replication and repair protein RecF |
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| Protein accession | YP_003159985 |
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| Protein GI | 256831258 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000951254 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.107465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATGTTT CTCACCTGTC CTTAGTGGAC TATCGCTCCT ACGAACACGT GGATATTGAG
TTCGCCCCTG GTGTGAATGT TCTGGTTGGT CACAACGGCC AAGGGAAGAC GAACATCGTT
GAGGCAATTG GCTACCTCGC GACACTGGCG TCACACCGTG TCGCTCATGA CACAGCACTT
ATTCGCGTAG GAGCGCAACG GGCGCTCATT CGATCGCGAG TTGTGCGAGG TGACCGGGCA
CAGGTCGTTG AGCTTGAACT ACTCCACGGT AAGGCGAACA AAGCGCGAGT GAATCGAGGC
CAACCGGGGC GCGCATCGAC AGTATTAGGG ATTGTGAAAA CGGTGGTGTT CGCGCCGGAG
GACCTAGTCT TGGTTAAAGG GGACCCGGAC GCACGACGTC GGTACCTTGA TGACCTCACC
GTGCTCATGA TTCCGCGGAT GCGCTCGGTC TTAGCTGACT ATGACAAGGT TGTGCGGCAG
CGCTCTGCCC TCTTGAAACA GCTGATGCGT GGGGGCGCTT CGCATGCTAG CGACGCTACG
TTGGCTGTGT GGGATGAACG AATGGTGGCG CTTGGGTCCC AGATCATTGG TGTGCGCCAG
CGACTCGTCG CTGCGCTTGC CCCTCACCTC GCGTCCGGGT ACGAAACAGT GAGTTCTGGG
CAATCGGAAG CCAAGATGAG GTACCGCCCC TCGCTGGAAT CCTTCCTTGA TGAACCAATG
CCAGCGGTGA TGAGTGTCGA GGAAATTTCA GTCATCTACG CGGAAGTCTT GGCGCGCGCA
AGACGGCGGG AGTTGGAACG TGGGGTGTGT ATCGTTGGCC CGCACCGTGA TGATGTGGAA
CAGACGTTGA ATAATTTGCC GGTTAAAGGG TACGCAAGCC ACGGGGAGAG TTGGTCTTAC
GCATTGGCTA TGCGGCTGGC GTCTTATCGA CTCATGACAG AGGGGCCGGA TGAGAATGAT
CCTGCGTCCG CTGACCTGCA GGATATGTGG TGGACAGACT CTCAAGAGGA CACTGAGCCA
ATTCTCATTC TTGACGATGT GTTTGCTGAG CTAGATGTTC GGCGCCGGCG ACAATTGGCG
GACATCGCGG CGCAAGCACG GCAGGTCATT ATCACTGCAG CGGTGGCGCA GGATGTTCCT
GACCAGTTGC GTGGCAGGAC GTTGTCTGTC ACGTTGGGTG CTGTCACTGA TATGGATGGT
GCCGAGGATC AGTTGAGTGT GAGTGGTGAG CGTGATGGCG ACCTATGA
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| Protein sequence | MYVSHLSLVD YRSYEHVDIE FAPGVNVLVG HNGQGKTNIV EAIGYLATLA SHRVAHDTAL
IRVGAQRALI RSRVVRGDRA QVVELELLHG KANKARVNRG QPGRASTVLG IVKTVVFAPE
DLVLVKGDPD ARRRYLDDLT VLMIPRMRSV LADYDKVVRQ RSALLKQLMR GGASHASDAT
LAVWDERMVA LGSQIIGVRQ RLVAALAPHL ASGYETVSSG QSEAKMRYRP SLESFLDEPM
PAVMSVEEIS VIYAEVLARA RRRELERGVC IVGPHRDDVE QTLNNLPVKG YASHGESWSY
ALAMRLASYR LMTEGPDEND PASADLQDMW WTDSQEDTEP ILILDDVFAE LDVRRRRQLA
DIAAQARQVI ITAAVAQDVP DQLRGRTLSV TLGAVTDMDG AEDQLSVSGE RDGDL
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