Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3241 |
Symbol | |
ID | 8378937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3670183 |
End bp | 3672312 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645002477 |
Product | glycoside hydrolase family 57 |
Protein accession | YP_003159732 |
Protein GI | 256831004 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAG CACTCTGCAT ACACGGTCAT TTTTACCAGC CGCCCCGCTT CGACCCCTGG CTCGAAGACG TACTGCCGGA AGGCAGTGCC GCCCCGGAAC ACGATTGGAA CATACGCATC ACCCGGGAAT GCTACGCTCC TCTGGCCTGG GCGCGCCGGC TCGGCGGGAC GGGCATGATC TGCGAGCTGG TCAATTGCTA TGCATGGATG AGCTTCAATT TCGGGCCCAC CTTGCTGCGC TGGATGGAAC TCCATGCCCC TGAGACCTAT ACGCGCATCC TGGAAGGGGA CAGGCAGAGC CGTGAGCGTC TTGGCCACGG CAATGCCCTG GCACAAGTGT ACCATCACTC CATCATGCCC TTGGCGACGG AATTGGACAA GGACCTGGAG ATAGCCTGGG CCGTCCAGGA TTTCCGGACC CGCTTCGGGC GTGATCCCGA AGGCATGTGG CTGGCCGAGA CCGCCGTGGA TCTGCCGACG CTCCAGGCCC TGGCCGATGC GGGGATCCGT TTCACCATCC TGGCTCCCCG GCAGGCGCAG GCCATTCGCG GCGCAGGGGG AGAATTTTCT CCCGTGACCG AAGACAGCCT CGATACTACG CGGCCCTATC TGGTCAAGCT CCCTCAAGGC AAGTCAATAA GCGTGTTTTT TTACGACGGG GCCGTCTCCC GGGCCGTGGC CTTCGAGCGC CTGCTCGGTA GCGGAGAGAA TTTCTGGGTC AGGCTTGTCG GTTCTTTTTC CCAGGGCCTT GGGAGCATCG CCACGGACGG AGAGTCCTAC GGGCATCATT TCATGTTCGG CGAAATGGCG CTGGCGTATG TCGTACAGCA GGCCAGGGAG GGGCGCGACA ACGTCGGCCT GACCAATTAC GGCGCCTATC TCGCGGCCCA TCCGGCCACG GACGAGGTGC TTATCCATGA AAACACCTCC TGGAGTTGCG TGCACGGGGT GGAGCGCTGG AAAACCCACT GCGGCTGCTC CGATGGCGGG CACCCGGACT GGATGCAGGA TTGGCGCAGA CCGCTCAGGC GCTGCCTCAA CTATCTGAAA TACTACGCGG ATGAACATTT TTTCAAACGG GGAAGCGCTT TTTTCCGCGA AAGCGGCGTT GCCCTGCAGG AGTACGGGCT GGTTTTGGCC GGAAGCGAAG CCCTGGAGTC GTTTCTGGAA AGGCACTGCC TGCCCGGCCT TGAGCCGGCG CAGCGCACCG ATGCCTGCCG GTTGCTGCTC ATGCAGCGGC TGGCCCTGGC CAGTTTTTCG AGCTGCGCCT GGTTCTTTGA CGACATTGCC CGGATTGAAC CCTTGAATGG TTTGACCTCT GCCCGGCGCG CGCTGGATCT GCTGGCGGCC ACGGGCGGAC CGGACGTGGA GGCCGGTTTT GTGCGCGTGC TGGCCGAAGC CCAGTCGAAC ATGCGTGAAG ATTGGGACGG GGCGGCCCTG TGGGAGGAGC TGGTCACCTC CCGGCGTCCG TCCCTGCACG AGCTTGCCGC CTATCCGCGC CGTTTTCCGG CGGCAAAGGA CCGGCCGGAG ATGGCTTGGC CGGGCGTTCG GCTTGCGCTT GAATCCGATG CCAAGGGCCA AAGGCTGCAC TGCTTCTGGA CCCGGACCCT GGAAGAGGAG ACGGCCTCGC TGTCAGGGCC GGAAGAGTTC CCGCCGCATT CCAGGCACAA GGCCGAGGTG GGTTTTCGTC TGGCCAGGGA AAACGAACGG GAGCTTTTGC AGCAATCCTG CCTTTTGGCC CGGAATATGG CGCCGCTCTT GTCCGGTTTT ACCGAAGGAC AAAGCGAGCC GCAGCAATCC CTGGCCATGC AGATTCCCGG ACTGGTCTGG AACTGGCTTT TCGAAGGCCA GGAGCTGCCT CGGGACATGC AGGACTCCCT GGCCGCATGG TTTGCGGCCA ACGCGGGCAT CCGCAAGCTG CTGGAACGCC TGATCGAAGA GCGCGGCACC CAGATGGCCT TGTCCCTGCC CGGGCAGGCC CACGCCCTGG TCGAGCTGAT CACTCGCTCG CGCCGCCTGG GGCTGTCCAT CTACTGGTGG GAAGCCCAGA ACGCGGTCAT GGCCGTGCCG AACAGATGCG TTCACGTGGA ATTGTGCACG CTGCTGGGGC TGTCGGTTCC GGAAATGTAG
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Protein sequence | MSKALCIHGH FYQPPRFDPW LEDVLPEGSA APEHDWNIRI TRECYAPLAW ARRLGGTGMI CELVNCYAWM SFNFGPTLLR WMELHAPETY TRILEGDRQS RERLGHGNAL AQVYHHSIMP LATELDKDLE IAWAVQDFRT RFGRDPEGMW LAETAVDLPT LQALADAGIR FTILAPRQAQ AIRGAGGEFS PVTEDSLDTT RPYLVKLPQG KSISVFFYDG AVSRAVAFER LLGSGENFWV RLVGSFSQGL GSIATDGESY GHHFMFGEMA LAYVVQQARE GRDNVGLTNY GAYLAAHPAT DEVLIHENTS WSCVHGVERW KTHCGCSDGG HPDWMQDWRR PLRRCLNYLK YYADEHFFKR GSAFFRESGV ALQEYGLVLA GSEALESFLE RHCLPGLEPA QRTDACRLLL MQRLALASFS SCAWFFDDIA RIEPLNGLTS ARRALDLLAA TGGPDVEAGF VRVLAEAQSN MREDWDGAAL WEELVTSRRP SLHELAAYPR RFPAAKDRPE MAWPGVRLAL ESDAKGQRLH CFWTRTLEEE TASLSGPEEF PPHSRHKAEV GFRLARENER ELLQQSCLLA RNMAPLLSGF TEGQSEPQQS LAMQIPGLVW NWLFEGQELP RDMQDSLAAW FAANAGIRKL LERLIEERGT QMALSLPGQA HALVELITRS RRLGLSIYWW EAQNAVMAVP NRCVHVELCT LLGLSVPEM
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