| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2211 |
|---|
| Symbol | |
|---|
| ID | 8377885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2544481 |
|---|
| End bp | 2545965 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 645001432 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_003158709 |
|---|
| Protein GI | 256829981 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.167884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTATC TCATACGCAA CTCGACGTTG CGCCTGGTGT CCTTTGGGGT GGGGATAGTC
TTTGCCCTGT TTGTGACGCC GGTCATAATA AATGCCATAG GCCAGGCCGC CTATGGTGTC
TGGGCGCTGA TCAGCGCCAC TGTGGCCAAC TATCTCCTGC TTGATTTCGG ACTTTCCCAG
GCGGTTTCCA AATTCGTGGC AGCGGCCATT GCCCGTGAAG ACCAGAAGGA AATAAATCGC
ATTTGTTCCA CTGGGATCGC GCTGAACGTC ATATCGTGTC TTTTGTCATG CATTATTACA
GTTGTGCTGC TTTATTTCGG CAAGGACCAT ATCCCGCAGG GCGCTGATTT TGCGCAAGTC
CAGACGTATT TTGCCATCTA TGCGGGCACA TTCTCCCTGC TCTTCCTTTT TCGAACCTGG
AACGGGGTGC TGGCGGGCGA GATGCGCTGG ACCCTGTTGG CCTTCATTTC CATGGTCAAG
AACGTGATCG TGAGCCTATC GGTCCTGATC TGGATATCCG GGGAAAACGG TCTGATGTTT
CTGTCCGTGG TCAATGGCGT GGGTTTTCTT CTGGAAGGCG TGGTCTACTG GATTTTCGCC
CGGCGCGGCT TTTCGGTCAG CATCCGCTTC AGGCATGTCG ATTGGCGGCT GGGGGGAGAG
CTTTTCCGGT TCGGGTTGAC CTCCCTGGTG GCTCAGGTGG GACAGGCTAT GCGCTTCAGG
TCGCAGCCAT ACATCATCGT CAAGGCCATC GGCGCGGAAG GGGTTGCGGT TTTTTCCATA
GCAACCCAAT TGATTTCGTA TTTTACCAAT CTCATTCGTA GCGCGTTCGG GATATTCATT
CCCCATTTCA GCCGTCTTCA GGCTCAACAC GACCACGATG GGATTCGGCA ATCCATGCTG
AGCGCGTTGT GGCTCAGTTA TCGGGTTTCG GCCTATGTCG GGCTTTGTCT TGTTTTCTAC
GGTGGAGAGT TTGTCGAGCT GTGGCTTGGT CCCGAATTTC GGGACGTGCA GCTTGTCCTT
GTGCCCATGG CGATCGGGTC AATATTCTCT ACAAGCATAA TCCCGGCACA AGAATTTCTC
ATGGGCATTT CCCAGCATAG AATAACGGCG ATTTGCAATA TAGGAGAGGG TATTTGCGTA
GTCTTCGCGT CAATTATCTC CATGATGTAC TTTGGGATTG TTGGGGTCGG GTGGTCGTTT
TTTGTCTGTT CTTTTATTTT TCGCGCATGC CTTCTTCCGT ACTATGCGTT TCGGCAGGCT
GATGCGCCTC TATCGAGTTA TATACAGTTG CTCGGATGCG TCGCACTGAC GCATGTCTTG
CCTCAATGGA TTTTCTGGAT TTCGGTCAGG GATTACATGG GGACGGGATA TCTTTCCTTG
TTTGCGATGT CGGTCATGCA GGGACTGGTA ATCATTGTGG TTCAATACGG GCTCTTCCGT
CTGGATCGCA GGTTGGTCGG GTTCGCGGAC GCGGTGCGGA CATGA
|
|---|
| Protein sequence | MRYLIRNSTL RLVSFGVGIV FALFVTPVII NAIGQAAYGV WALISATVAN YLLLDFGLSQ
AVSKFVAAAI AREDQKEINR ICSTGIALNV ISCLLSCIIT VVLLYFGKDH IPQGADFAQV
QTYFAIYAGT FSLLFLFRTW NGVLAGEMRW TLLAFISMVK NVIVSLSVLI WISGENGLMF
LSVVNGVGFL LEGVVYWIFA RRGFSVSIRF RHVDWRLGGE LFRFGLTSLV AQVGQAMRFR
SQPYIIVKAI GAEGVAVFSI ATQLISYFTN LIRSAFGIFI PHFSRLQAQH DHDGIRQSML
SALWLSYRVS AYVGLCLVFY GGEFVELWLG PEFRDVQLVL VPMAIGSIFS TSIIPAQEFL
MGISQHRITA ICNIGEGICV VFASIISMMY FGIVGVGWSF FVCSFIFRAC LLPYYAFRQA
DAPLSSYIQL LGCVALTHVL PQWIFWISVR DYMGTGYLSL FAMSVMQGLV IIVVQYGLFR
LDRRLVGFAD AVRT
|
|---|
| |