Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1299 |
Symbol | |
ID | 8376964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 1431413 |
End bp | 1433194 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645000528 |
Product | NERD domain protein |
Protein accession | YP_003157814 |
Protein GI | 256829086 |
COG category | [R] General function prediction only |
COG ID | [COG3972] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAA TGTTCCCGGA ATCAGCTTCC GTCTTCACGA CGGAAGGAGA AAAGGTTTTT TATAATTTCC TCAGCAAGGT TGCCAGGCCA GATTCTCAGA TTCTCGCGTG GTACGAACCC GATATATCCG GCCGAGAACC TGATTTCATA CTCTTCTCGC CAGATTGTGG ACTGATCGTT TTTGAAGTCA AAGATTGGCG AATTGAACAA GTACACGAAG CAAACCCGAA AGAATTTCGA TTACGTTGCG GCACCCATGA CGAGCCGCGC AAAAATCCGC AAGCGCAGGC CAGGGAATAT GTGAAGGAGT TGCTGACTCG CATCACCCGC GATCAGTCCG AGGCCAAACA ATCACCCGGA AAGTCTCCCG TCCCCATTAC AGCAGGGGTC GTCTTCCCTT ACATCACGAA ATTCGATTTT CTTGAAGCCA AGCTCGACCA GGTCATCCCC GTCAGTAAAA TCATATTCTG GGACGATCTG CATGAGCTGT CACCTTTCTG GTCAGACCCG TCAGGGGCGC TCTTCCGGAC ATGGTTGCAG GAAAAATATC CTCCCCTTTT TTCCTTCTCG CTTTCTCCGC GCCAAACAGC ATGGCTCAGA GCAATGCTAT TTCCCATCGT TCGCATCAAT CTGCCCCACC GGGCAGGTGC CGTTCATAAT GACAACGAAA AAGTCATCCA AGCACTCGAT CACTGCCAAG AACAATTGGC CAGAAATTTC ACGCAGGGCA AACGACTCGT CACCGGCCCG TCGGGAAGTG GGAAAACACT GATATTAGCC CATCAGGCGT GGCACTTGCC GAGGGTCAAT CCGAAAATCA AAAAAGTCCT CTTTACATGC TTCAACCTGT CGTTGCCGGG GTATATCCGC AGACTGCTGG CTCGAAAGCA TGTCCCCATG GGTGAAAACG GGGTCGAGGT CATCTCTATC TATGACCTGT GTGAACGCAT TCTTGGCGAA CGCTTGGCCC ATGCCAAAGA GCAGACGGAT TATTACGAAC TGGTTGTTCA AGAAGCGCTG GAAGCACTGT CTACAAAACT CGAGATGGGT TCGTGGGATG CTATCCTCGT CGACGAGGGA CAAGACTTCA CCCCGGAAAT GGCCCAACTT CTTCTGAAAC TCCTGCACCC AAAACACGGT GTGCTGACAA TCGCCATGGA TGAAAACCAA TCAATTTACA CCTGTGCAAC CCGCATGTGG GAGAACTTGG GAATTCATGG CCTGACGGTT TTTCGCCTTG CGGAGCAGTA CAGGTGCACA GGAAACATTG CTGATCTGGG TGCTCAACTC TTTGGCGCGT GTCCGCATAA GCCATGCGAA TCCGCCCACG CCGGCAACGC GCCAACAATA AGGGCTTTTC CGGATCAACA ACGCCTACTT GAAGGGATCA CAACCGAGAT TGCCCGGCGC GTCCAAGACG GAATCCCAAT GTCCGAAATA GCAGTACTTT ACACCAAAAC CAGGCTAAAA GACGGCTCTC TTTTGCCAGT CCAACTTATA AGACTATTAG AAACCAAAGG GGTATTGGCC GAATGGCCCG CAGAGGACGA GAGATCAAAG CGCCGCTTCG ACATCACTTC GGACACGGTT AAAATCTCAA CGATTCATAG CGTCAAAGGG ATGGATTTCG GCCATGTATT CCTGATCGGC CTGGACGATC TGAAGGACTA CCCAGACGGC AAAAACAGGC GTCTTGCATA CGCGGGAATC ACGCGCGCCC GGCATGAACT TTTCATTGCC TATGTCAAAA ATAGCGGAAT GATTCCGGCC CTCAAACTTT AG
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Protein sequence | MATMFPESAS VFTTEGEKVF YNFLSKVARP DSQILAWYEP DISGREPDFI LFSPDCGLIV FEVKDWRIEQ VHEANPKEFR LRCGTHDEPR KNPQAQAREY VKELLTRITR DQSEAKQSPG KSPVPITAGV VFPYITKFDF LEAKLDQVIP VSKIIFWDDL HELSPFWSDP SGALFRTWLQ EKYPPLFSFS LSPRQTAWLR AMLFPIVRIN LPHRAGAVHN DNEKVIQALD HCQEQLARNF TQGKRLVTGP SGSGKTLILA HQAWHLPRVN PKIKKVLFTC FNLSLPGYIR RLLARKHVPM GENGVEVISI YDLCERILGE RLAHAKEQTD YYELVVQEAL EALSTKLEMG SWDAILVDEG QDFTPEMAQL LLKLLHPKHG VLTIAMDENQ SIYTCATRMW ENLGIHGLTV FRLAEQYRCT GNIADLGAQL FGACPHKPCE SAHAGNAPTI RAFPDQQRLL EGITTEIARR VQDGIPMSEI AVLYTKTRLK DGSLLPVQLI RLLETKGVLA EWPAEDERSK RRFDITSDTV KISTIHSVKG MDFGHVFLIG LDDLKDYPDG KNRRLAYAGI TRARHELFIA YVKNSGMIPA LKL
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