Gene Dbac_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0877 
Symbol 
ID8376532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp958673 
End bp959836 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID645000116 
Productamidohydrolase 
Protein accessionYP_003157411 
Protein GI256828683 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases
[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAA ACCTGTTGGC CCACAGCCGC GAAGAACTGG ACTATGTACG CGCCATCCGC 
CGTGAACTGC ACCGCTTCCC CGAGGTGGGG ACGGACCTGC CCCGGACCAG GGCGCTGGTG
CTGCGTGAAC TTGCCAAGCT CGATCTGAAC GTGCGCGAAG ACGTGGGTGG CGGGATCGTG
GCCGACCTTC ATGGCCAAAA GGGAAGCTCG CGCATTGCCC TGCGCGCCGA CATGGACGCG
CTGCCGATCC AGGAAGAATC CGGACTCGAG TTCGCCTCCG AGATTTCAGG CCAGGGCCAT
ATGTGCGGTC ACGATGCGCA CACGGCCATG CTTCTGGGCG CCGCGCGCCT GGCGTGCGGC
CGGGGCAGGA CATCACACGC CGGAATCCGC TTTCTCTTTC AGCCCAACGA GGAATTCCAG
CCGGGCGGGG CCAAGGCCAT GACAGAAGCC GGATGCCTTG ACGGCGTGAG CGAGGTCTAC
GGTCTGCATG TCTGGCCCGG ACAGCCCACG GGCTGGTTCG GAACGCGTCA AGGCCCGCTC
ATGGCAAGGC CGGACGTCTT TTCCATCACG CTCAACGGCA AGGGCGGACA CGCCTCGGCC
CCGCACCAGT GCATAGACCC CATCCTGGCC GGCAGCCATC TGGTCGCCGC CCTGCAGGGC
ATCGTCTCCC GCCGGGTTGC GCCGCATGAA CGGGCAGTCC TGAGCGTGAC CCGCTTTCAG
GCCGGGAGCA GCTACAACAT CATCCCGGAC ACGGCATTTC TGCAGGGCAC GGTGCGCACT
CTTAACGAGA GCACCGGGGA CCTGGTGCAA GCAGAAATGC AAAGACTCGT CTCCGGCCTG
GCAGCGAGCA TGAACGTGCG GGCGGAACTG GATTACCAAC GGGGCTATCC GGTGGTGGTC
AACGATGCGT CGAGCACCGA CCGCGCCGTA AAGGTGCTGC AGGGCATCTC GGACAACGTT
GATGCGGGGA TCGAGCCGGT CATGGCGGGA GAGGATTTCT CGTACTACGT GAACAAAGTT
CCAGGCTGTT TCATCTTCAT GGGTTGCGGC CACTGCTCCG AAGACGGCCG GGGCGGCCTG
CACAACGCCT GTTTCCATCT GGACGAGGAC TGCCTAACCT GGGGCGTCGC GGCCCTGGCC
GGTTTGGCGT TGCAAAAGGC GTAG
 
Protein sequence
MITNLLAHSR EELDYVRAIR RELHRFPEVG TDLPRTRALV LRELAKLDLN VREDVGGGIV 
ADLHGQKGSS RIALRADMDA LPIQEESGLE FASEISGQGH MCGHDAHTAM LLGAARLACG
RGRTSHAGIR FLFQPNEEFQ PGGAKAMTEA GCLDGVSEVY GLHVWPGQPT GWFGTRQGPL
MARPDVFSIT LNGKGGHASA PHQCIDPILA GSHLVAALQG IVSRRVAPHE RAVLSVTRFQ
AGSSYNIIPD TAFLQGTVRT LNESTGDLVQ AEMQRLVSGL AASMNVRAEL DYQRGYPVVV
NDASSTDRAV KVLQGISDNV DAGIEPVMAG EDFSYYVNKV PGCFIFMGCG HCSEDGRGGL
HNACFHLDED CLTWGVAALA GLALQKA