| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_13430 |
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| Symbol | |
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| ID | 8399890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 1507126 |
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| End bp | 1510761 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644997410 |
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| Product | transcription-repair coupling factor Mfd |
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| Protein accession | YP_003154773 |
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| Protein GI | 257068518 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0858576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC AGACCACCGC CCCCCGCCCC ACGACCGCCG AGGCCCCGCT GCGCCCGCTG
CTGGACCAGC TCGCGCGCGG GCGCGACCTC ACCGCGGTCC GCGACCTGGT CGAGGCCGGC
GCCGAGTCCG GGGAGGGCGG CAGCATCGTC GCCGCCACCG GGCTGTTCCC CTTCCTCGTG
GCGGACCTCG CCCGCCGCGC CACCGCCGAG CAGCCGCTCG TGATCGTCAC CGCGACCACC
CGCGCGACCG AGGACCTGCG CGCGGCGCTG TCGGCGCTCG TCGGCACCGA GCATCTGGTG
GAGCTGCCCG CCTGGGAGAC GCTGCCCCAC GAACGGCTCT CCCCGCGCGC CGACACCGTC
GCCAAGCGGC TGTCGACCCT GCGCCGGATC GCCCATCCGG AGAGCGAGGA CCCGGCGCAC
GTGGTGCTCA TGCCGGTGCG CTCGCTGCTG CAGCCGATCG CCAAGGGCCT GGGCGAGCTG
CGCCCGGTGC GCGCCGCGGT GGGGGACACC TACCCTCTCG AGGACCTCGA GCGCGACCTC
ACGGGCGCCG CCTACGCGCG GGTGGACATG GTCGAGAAGC GCGGCGAGTT CGCCGTGCGC
GGCGGCATCC TGGACGTCTT CCCGCCCACC GAGCCGCATC CGGTGCGCGT GGACCTCTTC
GGCGACGAGA TCGACGACGT GCGGTACTTC TCCGTCGCCG ACCAGCGCTC CCTGGACCCC
GCCCCCCGGG GCCTGGACGC CCCGCCCTGC CGCGAGATCC TCCTGACCCC CGCGGTGCGC
GAGCGCGCCC GCGCCCGCGC CGAGGAGCTG CCCGGCGTGC GCGACCTGCT GCTGCGGATC
GCCGACGGCA TCGCGGCCGA CGGCATGGAG TCGCTCAGCC CGGTCCTCGT CGACGGCATG
GAGCAGGTCG CCGACGTGCT CCCGGCCGGT GCCCGCTTCC TCGTGATCGA CCCCGAGAAG
GCCCGCGCCC GGGCCGACGA GCTGGTCGCC ACCACCGACG AGTTCCTCGC CGCCGCCTGG
TCCAGCGCCG CCGCCGGCGG CGGGCTGCCG ATCGACGTCG GCGCGGCGAG CTTCGTGCCG
CTGTCCGAGG CGAAGGGCCA CGCCCGCGAG GGCGGACGGC CCTGGTTCAC CCTGGCCGCC
TTCGGGCTGG ACACGGACGT CGACCTCACC ACGTCCTCCA CCACGCATCC GGGCTACTCC
GGGAAGCCGG GGGACGCCGC GAAGGACCTC GAGCGCCGCC GCGCCGAGGG CTGGTCGGTG
CTGTCCACGA TGGTCGGTCC GGGCGGGGCC CGCCACGTGG CCGAGAACCT GCGGGCCGAG
GGGCTGCCGG CGGTGTTCTC CGCCGAGCTC GACGCCCCCG TGGCGCCCGG CGAGGCGGTG
GTCACCGTCG GCCCCTTCGC CGAGGGGCTC GTCGACGAGG ACCTCCAGCT GATCCTGGCC
GCGGAGCGGG ATCTCACCGG CAAGTCCGGG GCGCGCCGCG GCGAGGAGCG CAAGATGCCC
TCGCGGCGCC GCAACGTCGT CGACCCGCTG CAGCTGCGCC CCGGGGACCA CGTCGTCCAC
GCCCACCACG GCGTGGGCCG CTTCGTGGAG ATGACCCGCC GCGCCGTGGG CAGCGGTGCC
AAGCGCACCA CGCGCGAGTA CCTCGTCATC GAGTACGCGC CCTCGAAGAA GGGCCAGCCC
GGTGACCGCC TCTACGTGCC CAGCGACCAG CTCGACCAGG TCACCAAGTA CGTCGGCGGC
GAGGAGCCGA GCGTCAACCG GATGGGCGGC GCCGACTGGG CGAAGACCAA GTCCAAGGCC
CGCAAGGCGA TCCGGGAGAT CGCCGACGAG CTGGTGCGGC TGTACTCCGC TCGGCAGTCC
GCGCCCGGGC ACGCCTTCGG CCCGGACACG CCGTGGCAGC GCGAGCTCGA GGACTCCTTC
GAGTTCGTGG AGACCCCCGA TCAGCTGGTG ACGATCGACG ACGTCAAGGC CGACATGGAG
AAGTCGGTCC CCATGGATCG CCTGATCCTC GGCGACGTCG GCTACGGCAA GACGGAGATC
GCGGTCCGCG CCGCCTTCAA GGCGGTCCAG GACGGCAAGC AGGTCGCCGT GCTCGCCCCC
ACCACGCTGC TCGCCCAGCA GCACCTGGAC ACCTTCGCCG AGCGCTACAC CGGCTTCCCG
GTGACCGTGC GCGGGCTCTC CCGCTTCCAG AACCCGGCGG ATTCCGAGGC GACCGTCGAG
GGCCTGCGGG ACGGCAGCGT GGACATCGTG ATCGGCACCC ACCGGCTGCT CACCGGCAAT
GTGCGCTTCA AGGACCTGGG CCTGCTGATC GTCGACGAGG AGCAGCGCTT CGGGGTCGAG
CACAAGGAGA CGCTCAAGGC GCTGCGCACC AACGTGGACG TGCTGTCGAT GTCCGCCACC
CCGATCCCGC GCACCCTCGA GATGGCGGTG ACGGGGATCC GGGAGCTCTC GATCCTCGCG
ACCCCGCCGG AGGAGCGCCA TCCCGTGCTC ACCTACGTCG GCGCCCAGGA GGACAAGCAG
GTCACAGCAG CGATCCGCCG TGAGCTGCTG CGCGAGGGCC AGGTGTTCTA CATCCACAAC
CGGGTCGAGG ACATCGACCG GGTCGCCGCG CACCTGCGCG AGCTGGTGCC CGACGCGCGG
GTGCAGGTCG CCCACGGCAA GATGAACGAG CACCAGCTCG AGCGGGTCCT CATCGACTTC
TGGGAGCGGG ACTTCGACGT GCTCGTGTGC ACCACGATCG TGGAGACCGG GCTGGACATC
TCCAACGCCA ACACCCTCAT CGTCGAGAAT GCGGACAGGT TCGGCCTCTC GCAGCTGCAT
CAGCTGCGCG GCCGCGTGGG CCGCTCGAGC GAGCGCGCCT ACGCGTACTT CCTCTACAAC
GCCACCAAGC CCCTCACCGA GCTCGCGCAC GACCGCCTCA CCACGCTCGC CACCAACACC
GACCTCGGTG CGGGCATGCA GGTGGCGATG AAGGACCTCG AGATCCGCGG CGCCGGCAAC
CTGCTGGGCG GGGAGCAGTC CGGGCACATC GCCGGGGTGG GCTTCGACCT CTACGTGCGG
ATGGTGGGGG AGGCCGTGGC GGCGTTCCGC GGCGAGGGCA GGGCGCCTGA GAAGGAGATC
CGGGTCGAGC TGCCGCTGGA CGCCCACGTG CCGCACGACT ACATCGGCTC CGAACGGCTG
CGGCTCGAGG CCTACTCGAA GCTCTCCGCC GTGCGCGAGG TCTCCGAGAT CGCGCAGATC
CGTGCCGAGC TCACCGACCG CTACGGCACC CCGCCCGCCC CGGTCGAGGT GCTGCTGGAC
GTGGCACGGT TCCGCATCGA CGCCCGCACC GCCGGGATCG ACGAGGTCCA AGCCCAGGGC
AAGATGATCC GCTTCGCCCA CCTCGAGGTG CCGGACTCCG CCGCGATGCG GATGAAGCGG
CTGTACCCGG GCACGGTGCT GAAGCCCGCG ATCCGTCAGG TGCTGGTGCC GCGGCCGATG
ACCTCCCGCC TGGGAGGCAC GGAGCTGCGC GATCACGAGC TGCTGGAGTG GTCCCGCGAC
GTGCTGCGCA CCCTCGTGCC CGCCGCCGCG GAGCAGATCT CCGCACCGAC CGTGCAGGAG
ACGGACGGGG CGCAGGGCCG GGGCTCGGCG AAGTAG
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| Protein sequence | MTAQTTAPRP TTAEAPLRPL LDQLARGRDL TAVRDLVEAG AESGEGGSIV AATGLFPFLV
ADLARRATAE QPLVIVTATT RATEDLRAAL SALVGTEHLV ELPAWETLPH ERLSPRADTV
AKRLSTLRRI AHPESEDPAH VVLMPVRSLL QPIAKGLGEL RPVRAAVGDT YPLEDLERDL
TGAAYARVDM VEKRGEFAVR GGILDVFPPT EPHPVRVDLF GDEIDDVRYF SVADQRSLDP
APRGLDAPPC REILLTPAVR ERARARAEEL PGVRDLLLRI ADGIAADGME SLSPVLVDGM
EQVADVLPAG ARFLVIDPEK ARARADELVA TTDEFLAAAW SSAAAGGGLP IDVGAASFVP
LSEAKGHARE GGRPWFTLAA FGLDTDVDLT TSSTTHPGYS GKPGDAAKDL ERRRAEGWSV
LSTMVGPGGA RHVAENLRAE GLPAVFSAEL DAPVAPGEAV VTVGPFAEGL VDEDLQLILA
AERDLTGKSG ARRGEERKMP SRRRNVVDPL QLRPGDHVVH AHHGVGRFVE MTRRAVGSGA
KRTTREYLVI EYAPSKKGQP GDRLYVPSDQ LDQVTKYVGG EEPSVNRMGG ADWAKTKSKA
RKAIREIADE LVRLYSARQS APGHAFGPDT PWQRELEDSF EFVETPDQLV TIDDVKADME
KSVPMDRLIL GDVGYGKTEI AVRAAFKAVQ DGKQVAVLAP TTLLAQQHLD TFAERYTGFP
VTVRGLSRFQ NPADSEATVE GLRDGSVDIV IGTHRLLTGN VRFKDLGLLI VDEEQRFGVE
HKETLKALRT NVDVLSMSAT PIPRTLEMAV TGIRELSILA TPPEERHPVL TYVGAQEDKQ
VTAAIRRELL REGQVFYIHN RVEDIDRVAA HLRELVPDAR VQVAHGKMNE HQLERVLIDF
WERDFDVLVC TTIVETGLDI SNANTLIVEN ADRFGLSQLH QLRGRVGRSS ERAYAYFLYN
ATKPLTELAH DRLTTLATNT DLGAGMQVAM KDLEIRGAGN LLGGEQSGHI AGVGFDLYVR
MVGEAVAAFR GEGRAPEKEI RVELPLDAHV PHDYIGSERL RLEAYSKLSA VREVSEIAQI
RAELTDRYGT PPAPVEVLLD VARFRIDART AGIDEVQAQG KMIRFAHLEV PDSAAMRMKR
LYPGTVLKPA IRQVLVPRPM TSRLGGTELR DHELLEWSRD VLRTLVPAAA EQISAPTVQE
TDGAQGRGSA K
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